Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00803 ATGGTGTTCATGGATTTGGAATGGTTGTTTCCAATTCCaattaatttctctcttttttcaacAATATTGTTTACAGTATTGGCTTTAGTAGGAGGATGGTTGACTTATCTATATGGGCCGTATTGGAAGGTAAGGAATGTTCCAGGCCCACCATCTCTGCCATTGGTAGGACACCTTCACTTGCTGGCTAAACATGGCCCTGATGTTTTCTCAATCCTTGCCAAGCAATATGGCCCAATCTACAGATTTCATATGGGAAGACAGCCATTAATAATTATAGCAGATGCAGAACTGTGTAAAGAAGttggaataaaaaaatttaaagacatTCCAAACAGAAGCACTCCCTCTCCCATTAAAGCTTCTCCACTTCACCAAAAGGGACTCTTCTTCACCAGGGATTCACAATGGTCTACAATGAGAAACACAATTTTGTCTGTATATCAACCATCACATCTATCAAGTTTAGTGCCAACAATGCAATCATTCATAGAATCTGCCACTCAAAATCTTGACTCTCAAACAAAAGACATTGTCTTTTCTAATTTATCGCTTAAACTCGCGACAGACGTGATTGGACAAGCAGCATTTGGTGTTAACTTTGGCCTCTCTGAACCTCATTCCGCTCGCAATGAAATCGAGAGTGTTGCTGTTAATAAGGACGATGTAATGAGCGCAAGTGCTAGTAATGAAGTAACAGATTTCATCAACCAACATATATACTCTACAACTCAACTTAAGATGGATTTGTCCGGTTCATTCTCAATCATACTTGGTCTACTTGTTCCAATTCTTCAGGAACCGTTTAGACAGATTTTGAAGCGAATACCGGGCACCATGGACTGGAAAATCGAGCATACTAACAAAAATCTAGGTGGCCGTCTTGATGAGATTGTAGAGAAGAGAATGAATGATAGGACACGTAGTTCTAAGGATTTCTTGTCACTTATACTAAATGCTAGAGAATCAAAAGCTGTTTCAGAAAATGTTTTCACACCTGAATATATCAGTGCTGTTACATATGAACACTTGCTTGCTGGATCAGCAACCACTTCCTTTACTTTATCTTCTATTGTCTATTTGGTAGCTGCACATCCAGAAGTTGAGAAAAAGTTGCTTGAAGAGATTGATGGGTTTGGTTCAATAGATCATATACCTACTTCTCAAGATCTCCATGACAAGTTCCCTTATCTTGATCAGGTGATCAAAGAGGCGATGCGGATTTACATTGTATCACCATTAGTAGCAAGAGAAACATCAAATGAAGTAGAGATTGGAGGTTACCTTCTTCCAAAGGGAACTTGGGTTTGGTTAGCTCTTGGCGTTCTAGCAAAAGATCCGAAAAATTTTCCAGAGCCAGAAAAGTTCAATCCAGAACGGTTTGATCCTAACTGTGAAGAAATGAAACAAAGACACCCTTATGCTTTCATACCATTTGGAATTGGTCCTCGAGCTTGCATTGGTCAGAAATTTTCCATACAAGAGATCAAGCTTTCTCTCATCCATTTATACAGAAAATACTTGTTTCGGCATTCACCTAATATGGAAAACCCTTTAGAGCTCGAATATGGCATAGTTCTCAACTTCAAGCATGGTGTCAAACTGAGAGCCATAAAAAGAACACCGAGGAGCTGCTAA 1638 0.3852 MVFMDLEWLFPIPINFSLFSTILFTVLALVGGWLTYLYGPYWKVRNVPGPPSLPLVGHLHLLAKHGPDVFSILAKQYGPIYRFHMGRQPLIIIADAELCKEVGIKKFKDIPNRSTPSPIKASPLHQKGLFFTRDSQWSTMRNTILSVYQPSHLSSLVPTMQSFIESATQNLDSQTKDIVFSNLSLKLATDVIGQAAFGVNFGLSEPHSARNEIESVAVNKDDVMSASASNEVTDFINQHIYSTTQLKMDLSGSFSIILGLLVPILQEPFRQILKRIPGTMDWKIEHTNKNLGGRLDEIVEKRMNDRTRSSKDFLSLILNARESKAVSENVFTPEYISAVTYEHLLAGSATTSFTLSSIVYLVAAHPEVEKKLLEEIDGFGSIDHIPTSQDLHDKFPYLDQVIKEAMRIYIVSPLVARETSNEVEIGGYLLPKGTWVWLALGVLAKDPKNFPEPEKFNPERFDPNCEEMKQRHPYAFIPFGIGPRACIGQKFSIQEIKLSLIHLYRKYLFRHSPNMENPLELEYGIVLNFKHGVKLRAIKRTPRSC 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00803 545 PRINTS P450 superfamily signature 486 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu07g00803 545 PRINTS P450 superfamily signature 400 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu07g00803 545 PRINTS P450 superfamily signature 346 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu07g00803 545 PRINTS P450 superfamily signature 477 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu07g00803 545 Gene3D Cytochrome P450 37 543 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu07g00803 545 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 479 488 IPR017972 GO:0005506|GO:0016705
Tsu07g00803 545 PANTHER CYTOCHROME P450 FAMILY PROTEIN 19 541 - -
Tsu07g00803 545 PRINTS E-class P450 group I signature 355 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu07g00803 545 PRINTS E-class P450 group I signature 439 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu07g00803 545 PRINTS E-class P450 group I signature 335 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu07g00803 545 PRINTS E-class P450 group I signature 486 509 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu07g00803 545 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu07g00803 545 PRINTS E-class P450 group I signature 399 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu07g00803 545 PRINTS E-class P450 group I signature 476 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu07g00803 545 Pfam Cytochrome P450 48 527 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu07g00803 545 SUPERFAMILY Cytochrome P450 41 540 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tsu07g00803 545 PANTHER THROMBOXANE-A SYNTHASE 19 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00803 Tsu-Chr7 6583375 6589850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00803 85 540 Cytochrome P450 AT2G26170 74.561 0.0 673
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00803 K20771 - gmx:100808297 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00803 07 6583375 6589850 Tsu07g00803 07 6583375 6589850 ECH
Tsu01g00546 01 4784073 4786967 Tsu07g00803 07 6583375 6589850 PCT