Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00802 ATGGGTGCTTCAGGAAAATGGATGAAAGCATTAATCGGATTCAAGAAACCAGACAAAGATGAACATgtgAAGGAAGGAGGTAAGAGTAAGAAATGGAGGTTATGGAGAAGTTCATCAGGTGATAACAGTTCATGGAAAGGTTTCAAAACTAACCCTCACAAAGCAGCTTCTGAAGGGTCTGAATCACCAACTGCAGCAGAAGCTTTCACCGCCGCAGTAGCCACTGTTGTGAGAGCTCAGCCTAAGGATTTTAGACTTGTTAGACAAGAATGGGCTGCTATAAGAATCCAAACTACTTTTCGTGGCTTCTTGGCAAGAAGGGCTTTGCGGGCTTTGAAGGCGGTGGTGAGGATTCAAGCACTTGTCAGGGGTAGACAAGTGAGGAAGCAAGCTGCAGTGACATTGAGGTGCATGCAGGCCTTAGTTCGTGTTCAAGCTCGAGTAAGAGCTCGTCGTGTGAGGATGTCCATGGAGGGACAAGCCGTGCAGAATATGCTCAATGAGCGACGAAGCAAGCTTGAACTTTTGAAGGAAGCCGAGGAAGGGTGGTGTGATAGCATAGGAACATTGGAAGATGTTAAATCTAAAATACAAATGAGGCAAGAAGGAGCTTTCAAAAGAGAGAGGGCTCTTGCATACTCACTTGCTCAGAAGCAATGCAGGCCAGCCTCAAGCATTAACTCACGGACAAACGCCTCATTTTCTTCTCTCAAGAATCACGAGATGAACAAAGCTAACGGGGGATGGAGTTGGTTGGAAAGATGGATGGCAGCCAAGCCTTGGGAGACTAGATTGATGGAACAATCTCATGCCGAAAGCTTAGAGAAAACCCCACCACCACCTCCAAAGAAGTTTGTGGAATCCATTGTAAGCTCTAATTCGAAACCATGCTCAGTCAAAATCAAGAAGAACAATGTCACTACAAGGATTTCTGCTAAGCCTCCACCCCACATTGGACAAGCTACTCGTTCGTCATCAAGTCCTAGTTCCGAGTTTCGGTATGACGAGAGTTCTGCATCATCTTCTATTTGTACATCCGCAACACCAATGTCAGGGAACACTTGTGAAAGGACCGAGGATAGTAGTAGCAGTACTAGGCCAAATTACATGAACCTGACTCAGTCAACAAAGGCGAAGCTAAAAACCGGTAATCCAATGTACAACAGAGCTCAAAGGCAACAATCAATGGATGAGTTTCAATTTATGAAGAGGGCTGCAGTTTTCTCAAATGGAGATTCTAAAAGCATAGCTGCTTCTGATCATTCAGTCAACTTTTCTAGGCCACTTCACCTACCAATTCACTCGGACAAGAGCTCAGTTAGGCCGCGGTGA 1332 0.4527 MGASGKWMKALIGFKKPDKDEHVKEGGKSKKWRLWRSSSGDNSSWKGFKTNPHKAASEGSESPTAAEAFTAAVATVVRAQPKDFRLVRQEWAAIRIQTTFRGFLARRALRALKAVVRIQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSMEGQAVQNMLNERRSKLELLKEAEEGWCDSIGTLEDVKSKIQMRQEGAFKRERALAYSLAQKQCRPASSINSRTNASFSSLKNHEMNKANGGWSWLERWMAAKPWETRLMEQSHAESLEKTPPPPPKKFVESIVSSNSKPCSVKIKKNNVTTRISAKPPPHIGQATRSSSSPSSEFRYDESSASSSICTSATPMSGNTCERTEDSSSSTRPNYMNLTQSTKAKLKTGNPMYNRAQRQQSMDEFQFMKRAAVFSNGDSKSIAASDHSVNFSRPLHLPIHSDKSSVRPR 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00802 443 MobiDBLite consensus disorder prediction 318 369 - -
Tsu07g00802 443 MobiDBLite consensus disorder prediction 18 35 - -
Tsu07g00802 443 MobiDBLite consensus disorder prediction 413 443 - -
Tsu07g00802 443 ProSiteProfiles IQ motif profile. 89 117 IPR000048 GO:0005515
Tsu07g00802 443 PANTHER IQ-DOMAIN 5-RELATED 1 442 - -
Tsu07g00802 443 MobiDBLite consensus disorder prediction 18 63 - -
Tsu07g00802 443 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 442 - -
Tsu07g00802 443 SMART iq_5 88 110 IPR000048 GO:0005515
Tsu07g00802 443 SMART iq_5 111 132 IPR000048 GO:0005515
Tsu07g00802 443 MobiDBLite consensus disorder prediction 303 369 - -
Tsu07g00802 443 MobiDBLite consensus disorder prediction 36 58 - -
Tsu07g00802 443 Gene3D - 87 136 - -
Tsu07g00802 443 ProSiteProfiles IQ motif profile. 113 140 IPR000048 GO:0005515
Tsu07g00802 443 Pfam IQ calmodulin-binding motif 91 110 IPR000048 GO:0005515
Tsu07g00802 443 Pfam IQ calmodulin-binding motif 113 130 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00802 Tsu-Chr7 6580642 6583315 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00802 1 437 IQD Protein Family AT2G26180 60.909 3.45e-152 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00802 - - gmx:100799714 635.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00802 07 6580642 6583315 Tsu07g00802 07 6580642 6583315 ECH