Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00798 ATGTCTCTTCAGCAGCCACAACAAAACATAACAATGGTGGCTGTTGACAAAGACAAGAACAGTGCTTATTCTTTTCGTTGGGCAATTAGACATCTTGATAATCCTATCATTTATGCTGTTcatgttaaaaacaaaaatttacatAACCAGGGCACGAATGTTTTTGAACCGGATGAAGAAGATGTAGCAAATGTTTTCGGCAACTTACGTGGAATGTGTCAACGTAAAGTTGTAACCGTGAAAGAAGCCGTAGTCGATGATAATGATGTTGTGAAAGGATTATtagattttgcaaacaaaaaTCTGGTACATAGTATTGTCATTGGTGCATCCAAGAACCCTTTACCAAGTCTTAAAAAGTTTAAAGCATTTAATGATACACCAACAACCGTGATGAAATCAGCACCAGATTATTGTTCTGTATACGTAATTTCAAAATTGAAGATTGTGTCGGCTCGATCGGCAATACGATCAATGGCGAATCAGACTAGCCCAATAAATCAACTACCTTTTCAAGTATCCTCACagagtgaatttgaaaatggaaTAAGGTCAGTACTACCTAGAACTGGTGACTCTAATGAAGCATCAGAATCTAGGTCTTTCGACAGCATTCTTGGTACGGGAAAAGGATCGACGCGTGAAAGGCCAAGGAGTGCAGGAAGCAATCAATCATTGGACGTTATCGATACACCGGGTGGTCGTGGACGACAATGGGCGTCAATGGATGAAAGAGAGATGATTACACTTGCGCCAATTGTCGATGTAAATGGTGATTTGGATCTACTAGATTCCTATGGGACAAAGCCATCTAATCTTACCTCACAAGAACTTGAAGCTGAGATGAAAAGATTGAGGCGCGAACTGAAGCAAACTATGGACATGTACAGCTCAGCTTGCAAGCAAGCAATCTCAGCGAAAAATCAGGCGGAACAAATTCGTCAATGGAAATTGGAAGGGGAAAAAAAGGCTGTGGAATCTAGGATGTCTCAAGAGGCAGCTCTTGCAATGGCAGAAAGGGAGAAGGCTAGAGCCAAAGCTGCATTGGAAGCAGCTGAGGAAGCCAAGAGGAAGGCTGAACAGGAGGCACAAAGAAGAAGGGAGGTAGAGATGAAGGCAAGGAAAGAGGCAGAAGAGAGGGATCGAGTATTAACCGCATTGGCTCAGAAGGATAATCGATATCGAAAATACACAATGCAGGAGATTGAAGTTGCTACTGAGAAATTCTCACCATCAAAGAAACTAGGTGAAGGTGGATATGGACCTGTGTTTAAAGGTCACCTTGATCATACCGCAGTTGCAATCAAGCTTTTAAATCCCGAAGCTTCTCAAGGAAGGAAGCAATTCCAACAAGAGGTTGAGGTACTAAGTTGTATTAGACATCCAAATATGGTCCTCCTTCTCGGTGCATGTCCGGAGCATGGTTGTTTGGTGTATGAATTCATGGATAACGGTAGCTTAGAAGATAGATTATTTCGAAGACAAAACAGCAAGCCTCTATCATGGCAAAAAAGGTTCCAAATAGCAGCTGAGATTGGAACTGCACTCCTTTTCCTTCACcaaacaaagccagagcctaTCGTGCACCGAGACCTTAAACCATCAAACATTCTTTTAGACAAGAATTACGTGAGTAAAATCAGCGATGTTGGCCTCGCGAGATTAGTCCCTCCTTCTGTAGCTGACAATGTGACAcaatattacatgacttcagCTGCTGGAACATTATGTTATATTGATCCTGAGTATCAACAAACAGGAATATTAACAACACAATCAGATGTTTACTCATTGGGGATAATGCTACTACAGATAATCACAGCTAAGCCTCCAATGGGACTTGCTCACCATGTTAAAAAGGCGATCGAAAATGATCAAATCGAGGAGATTCTTGATCCTGTGGTGACTGATTGGCCAGTTGAAGCAGCTCTATCATTTGCTAAATTAGCATTGAGTTGTACAGAACTCAGCAAGAAAGATAGGCCAAGTCTTGCAACAGTTGTATTGCCAGAGCTTAACAGGTTAAGAGACCTTGGAGATATATAG 2046 0.3998 MSLQQPQQNITMVAVDKDKNSAYSFRWAIRHLDNPIIYAVHVKNKNLHNQGTNVFEPDEEDVANVFGNLRGMCQRKVVTVKEAVVDDNDVVKGLLDFANKNLVHSIVIGASKNPLPSLKKFKAFNDTPTTVMKSAPDYCSVYVISKLKIVSARSAIRSMANQTSPINQLPFQVSSQSEFENGIRSVLPRTGDSNEASESRSFDSILGTGKGSTRERPRSAGSNQSLDVIDTPGGRGRQWASMDEREMITLAPIVDVNGDLDLLDSYGTKPSNLTSQELEAEMKRLRRELKQTMDMYSSACKQAISAKNQAEQIRQWKLEGEKKAVESRMSQEAALAMAEREKARAKAALEAAEEAKRKAEQEAQRRREVEMKARKEAEERDRVLTALAQKDNRYRKYTMQEIEVATEKFSPSKKLGEGGYGPVFKGHLDHTAVAIKLLNPEASQGRKQFQQEVEVLSCIRHPNMVLLLGACPEHGCLVYEFMDNGSLEDRLFRRQNSKPLSWQKRFQIAAEIGTALLFLHQTKPEPIVHRDLKPSNILLDKNYVSKISDVGLARLVPPSVADNVTQYYMTSAAGTLCYIDPEYQQTGILTTQSDVYSLGIMLLQIITAKPPMGLAHHVKKAIENDQIEEILDPVVTDWPVEAALSFAKLALSCTELSKKDRPSLATVVLPELNRLRDLGDI 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00798 681 ProSiteProfiles Protein kinase domain profile. 409 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00798 681 MobiDBLite consensus disorder prediction 215 229 - -
Tsu07g00798 681 Pfam Protein kinase domain 411 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00798 681 PANTHER OS02G0152300 PROTEIN 10 679 - -
Tsu07g00798 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Tsu07g00798 681 Coils Coil 275 302 - -
Tsu07g00798 681 Gene3D Transferase(Phosphotransferase) domain 1 482 678 - -
Tsu07g00798 681 CDD STKc_IRAK 415 675 - -
Tsu07g00798 681 Gene3D HUPs 1 144 IPR014729 -
Tsu07g00798 681 Pfam Universal stress protein family 12 136 IPR006016 -
Tsu07g00798 681 Gene3D Phosphorylase Kinase; domain 1 387 481 - -
Tsu07g00798 681 MobiDBLite consensus disorder prediction 186 238 - -
Tsu07g00798 681 CDD STK_N 13 146 - -
Tsu07g00798 681 MobiDBLite consensus disorder prediction 186 208 - -
Tsu07g00798 681 Coils Coil 328 380 - -
Tsu07g00798 681 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 10 679 - -
Tsu07g00798 681 SUPERFAMILY Protein kinase-like (PK-like) 393 668 IPR011009 -
Tsu07g00798 681 SMART serkin_6 409 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00798 Tsu-Chr7 6533431 6537058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00798 82 679 Receptor kinase-like Gene Family AT5G12000 57.074 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Tsu07g00798 Pkinase 1.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00798 - - gmx:100798861 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00798 07 6533431 6537058 Tsu07g00798 07 6533431 6537058 ECH