Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00796 atggagGATCTCGAGGAGGGAGAGAATggaggaggagaagaagagGTGCTTGGTTCAAGCTTGACTATGGAGAAAGTAGCAGCTGCTAAGAAGTTCATTGAGAATCACTATAGGGCACAGATGAAGAATATTCAAGATCGGAAAGAGAGgCGTTggattttggaaagaaaattaGCTTCTTCAGATGTGCCAACTGAAGAACGGCTCAACCTCATCAAAGATTTAGAGAGGAAGGAAACTGAATATATGCGATTGAAAAGGCACAAAATTTGTGTTGATGATTTTGAGCTCTTGACTATCATTGGAAGGGGGGCTTTTGGGGAGGTTAGACTGTGTCGGGAGAAGAAATCTGGAAATATCTATGCCATGAAAAAGCTGAAGAAATCTGAAATGCTTAGGAGAGGCCAGGTGGAACATGTTAGAGCTGAGAGGAACTTACTGGCCGAAGTCGCCAGTCACTGCATTGTGAAACTTTACTACTCATTTCAGGATACTGAATActtgtatttaattatggagTATCTGCCTGGGGGTGACATTATGACTCTGCTGATGAGGGAAGACACCTTAAGTGAGAATATGGCTAGATTTTACATGGCACAGAGTGTGCTGGCCATAGAGTCTATTCATAAACACAATTACATTCACAGAGATATTAAACCCGATAACCTACTTCTGGATAAAAATGGCCACATGAAGCTCTCTGATTTTGGCCTCTGTAAGCCTATCGATTGCATTACCTTGCCTACACTGCATGAAAATCAGACCATGGATGATGAAACTTTGGCAGAGCCAATGGATGTTGATAGCTGTGTTCCTGATGCGGACAATCGGAAAAGCTGGAGAAGTCCGCGTGAGCAGCTTCATCATTGGCAGATGAACAGGAGGAAGTTGGCATTTTCAACAGTGGGGACGCCAGATTACATTGCTCCTGAAGTACTTTTGAAAAAAGGATATGGGATGGAATGTGATTGGTGGTCACTGGGAGCGATAATGTATGAAATGCTGGTTGGTTACCCTCCATTTTACTCTGACGACCCAATAACCACATGCAGAAAGATTGTTCATTGGAGAAACCATTTGAGATTTCCAGAAGATCCCCATTTGACATTTGAGGCTAAGGATCTAATCTACAGATTGCTGTGTGATGTTGATAATAGGTTAGGTACTCGAGGGGCACAGGAAATCAAGGCTCATCCATGGTTCAAGGGTGTAGAGTGGGATAAACTATATGAAATGGAAGCAGCATTTAAACCACAAGTCAATGGAGAACTGGATACCCAAAACTTCATGAAGTTTGATGAGGTAGAACCGCCAGATGCAGCAAGGGCTGGGTCTGGATCTTCAAGAAAGATGCTTCTGACTCCCAAAGATCTAAACTTTGTTGGTTATACTTACAAAAACTTCGATGCTGTAAAAGAAGGCCTTCGTCAGTCTTTGAGTGAGTCCATGCAAGATTATGCCTCCAAACGGACAGCTGATGAAACAGGCTTGCAAATGCTTGCGTCGTCTGGAGATCCTATGTTGGCTGTGGAAGACTTGCCTTCTCTAGTGGCAGTTGCTGGTGTCAAATTCAGCTACAAAGTGAGAATAAGTAAAGACAAGGAAGAATCAAATTTAGATAATAAAACAAGAGTTTTCATGGAGGAAATGTCGGTTGCAGTGCCATTAAGAGCAGGTTCTGACGAGGATCATATTGCTGACAATCTGGATGATGAAGTTGGTGTTTCAGCGGCCACATCGCCTTTGCATGAGAGAGAAGAGGAAATTCTGTTGTTGAATATGATATCTCAAAGTAGCGATGAACTTTTAGTCCCAGAAATTGATGAGGATGATTCGTTATCGTTAGACGGGGATCCAATTATTTACAGCACTCTATCAATAACCGGTGACAATAGTAGTGTTTGTAGAGATGAGTTTTTCAGTTCTGaagataattcaaattttaggaCAAGGAGTTCGATGGACATAGATAAGAACATCCCGTCTGTTGAAATTGTTGCCAGGGCTGCTGTTTTCGACAAGTCAAATGTGGAGGCAGGTATTATGAGTAAACCCCTTGCTGTAGCATTGAGCCTTGGAGACGAAACAGGAGTTAGATCTGACCCGATGCCTACTACAGATGTTCTTCGTCCAATGCCTCTTGAAAAAGGGGCAAGCGGAACAGTCGGTCGGAGTGTTTTTGAATTGGATTGTACCCCACTTTGGGGATTTACATCTTTGTGTGGAAAAAGACCCGAGATGGAAGATGCTGTGTCGATTGCACCTCGGATGTTGAAAATTCCTATTCAAATGCTAAATGGTAGCAAAAAGTATGATGGAATGAACAAGGATTTTAATCAGCAGACAGTTCATTTCTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTAGCAGATTATTGCCGTGATCGTATGCATTTGGCCTTAGCAGAGGAAATTGAATTGCTCAAGGAAGATCTTATAATTGGAAGTACCAAGGATGATTGTCAAGATTTATGGAGGAAAGCTTTCACTACTTGTTTTGTGAAAGTTGATGATGAAGTTGGGGGAAAAGCTAATTGTGAACCTGTTGCACCAGAGACTGTTGGTTCCACTGCTGTTGTAGCTATTGTTTGTTCGTCTCATATTATAGTCTCGAACTGTGGTGATTCGAGGGCGGTTCTATGTCGCGGAAAGGAACCCTTGGCTTTATCTGTGGATCATAAACCAAATCGAGATGATGAATATGCAAGAATCGAGGCAGCTGGTGGCAAGGTGATACAATGGAATGGTCATCGTGTATTCGGGGTTCTCGCAATGTCAAGGTCTATTGGCGATAGATATCTGAAGCCATGGATTATTCCCGAACCAGAAGTTATGTTCCTCCCTCGTGCAAAAGACGATGAATGTCTTATTCTGGCCAGTGATGGCTTGTGGGATGTCATGACGAATGAAGAAGCATGTGACTTAGCTCGGAGACGCATACTTCTCTGGCACAAGAAAAATGGCTCGGAGCTTTCCTCACTAAGGGGAGAGGGAATCGATCCTGCCGCACAGGCAGCTGCAGAGTACCTATCAAACCGTGCTTTGCAGAAAGGGAGCAAAGATAACATCACTGTCATCGTGGTAGATTTGAAAGCACAACGAAAATTTAAGAGTAAATCATGA 3150 0.42 MEDLEEGENGGGEEEVLGSSLTMEKVAAAKKFIENHYRAQMKNIQDRKERRWILERKLASSDVPTEERLNLIKDLERKETEYMRLKRHKICVDDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLRRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDIMTLLMREDTLSENMARFYMAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPIDCITLPTLHENQTMDDETLAEPMDVDSCVPDADNRKSWRSPREQLHHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPITTCRKIVHWRNHLRFPEDPHLTFEAKDLIYRLLCDVDNRLGTRGAQEIKAHPWFKGVEWDKLYEMEAAFKPQVNGELDTQNFMKFDEVEPPDAARAGSGSSRKMLLTPKDLNFVGYTYKNFDAVKEGLRQSLSESMQDYASKRTADETGLQMLASSGDPMLAVEDLPSLVAVAGVKFSYKVRISKDKEESNLDNKTRVFMEEMSVAVPLRAGSDEDHIADNLDDEVGVSAATSPLHEREEEILLLNMISQSSDELLVPEIDEDDSLSLDGDPIIYSTLSITGDNSSVCRDEFFSSEDNSNFRTRSSMDIDKNIPSVEIVARAAVFDKSNVEAGIMSKPLAVALSLGDETGVRSDPMPTTDVLRPMPLEKGASGTVGRSVFELDCTPLWGFTSLCGKRPEMEDAVSIAPRMLKIPIQMLNGSKKYDGMNKDFNQQTVHFFGVYDGHGGSQVADYCRDRMHLALAEEIELLKEDLIIGSTKDDCQDLWRKAFTTCFVKVDDEVGGKANCEPVAPETVGSTAVVAIVCSSHIIVSNCGDSRAVLCRGKEPLALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAKDDECLILASDGLWDVMTNEEACDLARRRILLWHKKNGSELSSLRGEGIDPAAQAAAEYLSNRALQKGSKDNITVIVVDLKAQRKFKSKS 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00796 1049 CDD PP2Cc 737 1039 IPR001932 -
Tsu07g00796 1049 SMART pkinase_C_6 403 468 IPR000961 GO:0004674|GO:0005524|GO:0006468
Tsu07g00796 1049 ProSiteProfiles PPM-type phosphatase domain profile. 735 1039 IPR001932 -
Tsu07g00796 1049 Gene3D - 722 1049 IPR036457 -
Tsu07g00796 1049 SMART PP2C_4 725 1037 IPR001932 -
Tsu07g00796 1049 CDD STKc_NDR_like 93 467 - -
Tsu07g00796 1049 Gene3D Transferase(Phosphotransferase) domain 1 181 419 - -
Tsu07g00796 1049 SMART serkin_6 95 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00796 1049 Pfam Protein kinase C terminal domain 421 466 IPR017892 GO:0004674|GO:0005524|GO:0006468
Tsu07g00796 1049 ProSitePatterns Protein kinases ATP-binding region signature. 101 124 IPR017441 GO:0005524
Tsu07g00796 1049 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Tsu07g00796 1049 SUPERFAMILY PP2C-like 732 1040 IPR036457 -
Tsu07g00796 1049 ProSiteProfiles AGC-kinase C-terminal domain profile. 403 476 IPR000961 GO:0004674|GO:0005524|GO:0006468
Tsu07g00796 1049 Gene3D Phosphorylase Kinase; domain 1 86 180 - -
Tsu07g00796 1049 PANTHER AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN 16 490 - -
Tsu07g00796 1049 ProSitePatterns PPM-type phosphatase domain signature. 786 794 IPR000222 GO:0043169
Tsu07g00796 1049 SUPERFAMILY Protein kinase-like (PK-like) 78 444 IPR011009 -
Tsu07g00796 1049 ProSiteProfiles Protein kinase domain profile. 95 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00796 1049 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 490 - -
Tsu07g00796 1049 Pfam Protein phosphatase 2C 762 1032 IPR001932 -
Tsu07g00796 1049 Pfam Protein kinase domain 96 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00796 1049 Pfam Protein kinase domain 293 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00796 Tsu-Chr7 6501331 6513354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00796 1 509 AGC Kinase Gene Family AT4G33080 79.804 0.0 844
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Tsu07g00796 PP2C 8e-66 CL0238
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00796 07 6501331 6513354 Tsu07g00796 07 6501331 6513354 ECH