Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00793 ATGGCGCCTCCCAAAGTAACCGATTACGAACGCAAGCGACTCGAAAACATTCGCCGCAACAATGAAATGATGGAAGCACTCAAACTCCAATCCAAAGCCTCTCAACTCTCCAACCATACACAAGTTCTTGTTACCAAATCGGAGAAGAAACCAAAAATCGAAACTCCAATTCTTCTCAGACGCTCACCTCGAACAATAGGTGGTGTTAGCAGTGACAGTGGTAAGAAGAAGGAAGTTAGAGATAAAGTTGAATTCAAAACCAAGTCAGAGGTTGAAATTGTGGATGATGGCTTCAAGTGGAGAAAGTACGGACAAAAGATGGTGAAAAACAGCCCCAATCCAAGGAACTATTATAAGTGTACAGTGAATGGATGCCAAATGAAAAAGAGAGTTGAGAAAGATGTGGATGATTCGAGTTATGTAATAACCTACGACGGCACACATACTCATCCAAGTTTTCACTAG 465 0.4172 MAPPKVTDYERKRLENIRRNNEMMEALKLQSKASQLSNHTQVLVTKSEKKPKIETPILLRRSPRTIGGVSSDSGKKKEVRDKVEFKTKSEVEIVDDGFKWRKYGQKMVKNSPNPRNYYKCTVNGCQMKKRVEKDVDDSSYVITYDGTHTHPSFH 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00793 154 Pfam WRKY DNA -binding domain 95 151 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g00793 154 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 34 152 IPR044810 GO:0003700
Tsu07g00793 154 Gene3D WRKY domain 78 152 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu07g00793 154 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 34 152 - -
Tsu07g00793 154 SUPERFAMILY WRKY DNA-binding domain 87 152 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu07g00793 154 ProSiteProfiles WRKY domain profile. 89 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g00793 154 SMART WRKY_cls 94 152 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00793 Tsu-Chr7 6484085 6486517 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00793 82 152 WRKY Transcription Factor Family AT5G26170 72.222 6.37e-35 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu07g00793 WRKY 7e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00793 - - gmx:100819462 135.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00793 07 6484085 6486517 Tsu07g00793 07 6484085 6486517 ECH