Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00788 ATGAGTTTAAGAACAAAAGAAGATGATTCATCTTCTGAAATCCATATACCAGCTGAGATTGATTGGCATATGTTAGACAAATCAAAGTTTTTCTTCCTTGGCGCCGCCTTATTTTCCGGTGTTTCAGCTGCACTTTATCCAATGGTTGTGTTGAAAACTCGTCAACAGGTTTCTTCTTCACACTACTCTTGTATCAACATGTCTTGTGCTATTATGCGTTATGAAGGTTTTAGAGGTTTTTATAAAGGTTTTGGTACTTCTTTAATGGGAACTATTCCTGCTAGAGCACTTTATATGACAGCACTTGAAGTTACAAAAAGTAACGTTGGTACTGCTTTTGTTGAATTGGGTTTTTCTGATAATACTGCTACTGCTGTTGCTAGTGCTGCTGCTGGTGTTACTTCTGCTATGTCTGCACAATTAGTTTGGACCCCAATTGATGTTGTGAGTCAAAGACTCATGGTACAAGGTTGTAGTAGTAGTGTTGGTGGTGGAAAGAGTATTTTGGCTAATCTTAACTCTGAGAATTATAGAAATGGTTTGGATGTTTTTAGGAAAATTCTTTATGCTGATGGACCAAGAGGGTTTTATAGAGGATTTGGGATTTCAATATTGACTTATGCACCTTCTAATGCTGTTTGGTGGACTTCTTATTCTATGGTTCATAGGTTCATTTGGGGTAATTTTGGTTCATGTTTGTGTAAGAGTGATAAAAATTTGGGTGATGGATGTGTTGGTTTTAGGCCTGATTCTAAGGCAATGGTAGGTGTACAAGGTTTGAGTGCTTGTTTAGCTAGTGGAGTTTCTGCAATTGTGACAATGCCTTTTGATACTATTAAGACTAGATTGCAGGTTTTGGATACAGAAGAGAATGGTAGAAGAAGGCCATTAACTTTTGTTCAAACTGTTAGGAATTTGGTGAATGAAGGTGGTTTGTTTGCTTGTTACAGAGGATTAGGACCAAGATGGGTTTCTATGTCTATGTCGgctacaacaatgattacaacTTACGAGTTTTTGAAACGCTTGTCTACCAAGAGGCAAGATTGA 1050 0.3686 MSLRTKEDDSSSEIHIPAEIDWHMLDKSKFFFLGAALFSGVSAALYPMVVLKTRQQVSSSHYSCINMSCAIMRYEGFRGFYKGFGTSLMGTIPARALYMTALEVTKSNVGTAFVELGFSDNTATAVASAAAGVTSAMSAQLVWTPIDVVSQRLMVQGCSSSVGGGKSILANLNSENYRNGLDVFRKILYADGPRGFYRGFGISILTYAPSNAVWWTSYSMVHRFIWGNFGSCLCKSDKNLGDGCVGFRPDSKAMVGVQGLSACLASGVSAIVTMPFDTIKTRLQVLDTEENGRRRPLTFVQTVRNLVNEGGLFACYRGLGPRWVSMSMSATTMITTYEFLKRLSTKRQD 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00788 349 Pfam Mitochondrial carrier protein 39 108 IPR018108 -
Tsu07g00788 349 Pfam Mitochondrial carrier protein 258 346 IPR018108 -
Tsu07g00788 349 Pfam Mitochondrial carrier protein 124 227 IPR018108 -
Tsu07g00788 349 Gene3D Mitochondrial carrier domain 29 349 IPR023395 -
Tsu07g00788 349 SUPERFAMILY Mitochondrial carrier 23 340 IPR023395 -
Tsu07g00788 349 PRINTS Mitochondrial carrier protein signature 138 156 IPR002067 GO:0055085
Tsu07g00788 349 PRINTS Mitochondrial carrier protein signature 35 48 IPR002067 GO:0055085
Tsu07g00788 349 PRINTS Mitochondrial carrier protein signature 197 215 IPR002067 GO:0055085
Tsu07g00788 349 PRINTS Mitochondrial carrier protein signature 262 284 IPR002067 GO:0055085
Tsu07g00788 349 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 1 349 - -
Tsu07g00788 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 224 IPR018108 -
Tsu07g00788 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Tsu07g00788 349 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 349 - -
Tsu07g00788 349 ProSiteProfiles Solute carrier (Solcar) repeat profile. 253 343 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00788 Tsu-Chr7 6463955 6465772 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00788 13 348 Chloroplast and Mitochondria Gene Families AT5G26200 67.560 1.72e-162 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00788 K15121 - gmx:100784202 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00788 07 6463955 6465772 Tsu07g00788 07 6463955 6465772 ECH