Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00786 ATGCATGAAGATCAACAATTGAGTCTACCTTCAATTCAAACTCCGGCTTTGCCGAACCAAAACGAAGTGTTAGCAATTGATCAATGGCCACCCACACAAATGCCATTTTTTTGCACTTGTTGTCAAGTTCTTAGAGAAATCATTCATGCTAATgGTTTTCAATTTGAAAAGCTTGAGATTCATGGAAGAGTGGGGTTGATTACACATGCAATTCATCATCAGTTACCTGTTAATGGGAACAATCCAAATTATCAAATGATTGATTTTTGCAGGAGTAGTCTTgatgaaataaagaaatatttggCGAAATATTGCGTCGATCGTAATTCATCAGGGTACTTTATACTGCAAGATCCAATGTCTGCATTTTATGAGACTCTTTGCactggattggattggattgatGATATTAATATGGAAGGTCTTCTTGATAATAATCAAACTAATTCAGGTTTGAAAAAATCTGCAAGTTTGACATTGAGTGATTTACGCGATTACTTTCATCTACCGATTGAGGAAGCGTCAGATCATCCGAATGTGAAGTTATGCCCAACAGTTTTGAAGAAAACATGTCGTAAAGCCGGATTACAAAGATGGCCTTATAGAAAGGTGAAAAGTCTTTTGAAGCAGATAGCCTTAATGGGAGCACAATTGGATGGACAAGATTCCACGGCAAGGGCAAGGACTGAACATGAAATTAATAGGCTTAAACAAGAAATGATTGCACATTGTGGTGGTATCATACCAACGGCGATGTATAACATCGCCGCCTTCTTGCCACTGCAGTATCAGCAGCAGCAGTAG 804 0.3657 MHEDQQLSLPSIQTPALPNQNEVLAIDQWPPTQMPFFCTCCQVLREIIHANGFQFEKLEIHGRVGLITHAIHHQLPVNGNNPNYQMIDFCRSSLDEIKKYLAKYCVDRNSSGYFILQDPMSAFYETLCTGLDWIDDINMEGLLDNNQTNSGLKKSASLTLSDLRDYFHLPIEEASDHPNVKLCPTVLKKTCRKAGLQRWPYRKVKSLLKQIALMGAQLDGQDSTARARTEHEINRLKQEMIAHCGGIIPTAMYNIAAFLPLQYQQQQ 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00786 267 PANTHER RWP-RK DOMAIN PROTEIN 2 245 - -
Tsu07g00786 267 ProSiteProfiles RWP-RK domain profile. 138 227 IPR003035 -
Tsu07g00786 267 PANTHER PROTEIN RKD4 2 245 IPR044607 GO:0003700
Tsu07g00786 267 Pfam RWP-RK domain 157 207 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00786 Tsu-Chr7 6458010 6459386 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00786 156 207 AtRKD Transcription Factor Family AT4G35590 55.769 1.01e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Tsu07g00786 RWP-RK 2.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00786 - - cam:101503746 370.163