Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00785 atgaaagcATTCGCAATATCATCGTCACTATTATCCTTGAAATCTTTGAATTTCAACCATTACATTCCAAATCCAAGAATCTCCAATCCCTTTCTTCTCTCTCGCCGCAATTCCCAATTCCGAAGCAtggcttcttcatcatcttcatcactcaTCAATTCACAACTCGCACGTTCACCACCCGCAATTCCCATTCCAACTCCACCTCTCACCAACTTCAAAATCGGTCTCTGTCAACTCTCTGTCACTTCCGATAAAGCCAAAAACATCGCTCACGCTCGTTCTGCTATTCAAGACGCTGCTGCCAAGGGTGCCAAACTCGTCCTTTTACCCGAAATTTGGAATAGTCCTTATTCAAATGCTAGTTTTCCTGTTTATGCTGAGGATATTGATGCTGGTGGTGATGCTTCACCTTCTACTGCTATGCTTTCCGAACTCTCTCGTTTATTGAATATCACTATTGTTGGTGGTTCTATTCCTGAACGTTCTGGTGATCGTTTGTATAATACTTGTTGTGTTTTTGGCACTGATGGTAAACTCAAAGCCAAACACCGTAAGATACATCTTTTTGATATTGACATCCCCGGGAAGATTACCTTTATTGAATCAGAAACTCTTACTGCTGGGGAGACTCCAACAATTGTTGACACAGAGGTTGGACGCATTGGCATAGGCATCTGTTATGACATTAGGTTTCCCGAACTAGCAATGATATATGCTGCAAGAGGGGCTCACTTGCTCTGCTATCCTGGGGCTTTTAACATGACAACTGGACCATTGCATTGGGAGTTATTGCAGAGGGCAAGGGCTACAGATAATCAGTTATATGTGGCAACCTGTTCACCTGCTCGGGATACTGGATCTGATTATGTGGCTTGGGGTCACTCCACTCTTGTTGGTCCATTTGGAGAAGTTCTGGCTACTACAGAACATGAGGAGGCAATCATTATAGCAGAAATTGATTATTCCATATTGGAGCAGAGAAGGACAAATCTCCCTGTGACTAAGCAACGGCGAGGTGATCTTTACCAATTGGTGGATTTGCAGAGGCTGAATTCCCACTGA 1065 0.4216 MKAFAISSSLLSLKSLNFNHYIPNPRISNPFLLSRRNSQFRSMASSSSSSLINSQLARSPPAIPIPTPPLTNFKIGLCQLSVTSDKAKNIAHARSAIQDAAAKGAKLVLLPEIWNSPYSNASFPVYAEDIDAGGDASPSTAMLSELSRLLNITIVGGSIPERSGDRLYNTCCVFGTDGKLKAKHRKIHLFDIDIPGKITFIESETLTAGETPTIVDTEVGRIGIGICYDIRFPELAMIYAARGAHLLCYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPARDTGSDYVAWGHSTLVGPFGEVLATTEHEEAIIIAEIDYSILEQRRTNLPVTKQRRGDLYQLVDLQRLNSH 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00785 354 Pfam Carbon-nitrogen hydrolase 75 325 IPR003010 GO:0006807
Tsu07g00785 354 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 73 322 IPR003010 GO:0006807
Tsu07g00785 354 CDD nit 74 339 IPR045254 GO:0016811
Tsu07g00785 354 ProSitePatterns Uncharacterized protein family UPF0012 signature. 223 243 IPR001110 -
Tsu07g00785 354 PANTHER NITRILASE-RELATED 31 353 - -
Tsu07g00785 354 SUPERFAMILY Carbon-nitrogen hydrolase 72 346 IPR036526 -
Tsu07g00785 354 PANTHER OMEGA-AMIDASE, CHLOROPLASTIC-LIKE 31 353 - -
Tsu07g00785 354 Gene3D - 71 348 IPR036526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00785 Tsu-Chr7 6449647 6454374 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00785 K13566 - gmx:100817195 537.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00785 07 6449647 6454374 Tsu07g00785 07 6449647 6454374 ECH
Tsu07g00785 07 6449647 6454374 Tsu01g00881 01 8026876 8032183 ECH