Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00782 atgAACACGAGAAATAGTCCTCGACCACAAAAGAGTCTGTCTCGGCAGTCATCGAAGTCAAATTCGAGGGCAAAGCAAGAGCCACTTAGCCCATTTTCCGGTGGTGGATGTTGTCGAGGCTTCACCAGCGTGAAGACTGTGGCATCCACCACATCAACCTTGCAACAACATCAGCAGATCCAACAACGTAATGAGAGTTTGGAAGTGAAGGTAGGAGATTTGGAAAAGGAGGTGCAAAAGCAAACAGAACTCAGAGTGATGTATAGAAAAAGAATGGAAAGAACACAAGACTATTTAAGGTACTGCCTCCAAATAGCACAAGAGAATGGAATCTTGGAACACATTGTCCAATCCAAAGGTGAACTTCAACATTCTCCTCTCTCTATCAACAATGTCAGCTCCATTACCAATAGTCCTCAAATTCTCACTCCAACAATGCACCAGCACCACCCCAATCTAGAGGCCATCATTGACCAAGCAAAAATCAATGGATGGTATATTAACCCAACAGAGATTCAATTGGATGATAAAATAGGACAAGGAACCACAGCAGACATATACAGGGGAGCATGGCGTGGATTCGATGTTGCAGTGAAATGCATTACACCTGAATTCTTCCGCACAAATGCAAACGGTGTTGAATTCTTTGCTCAAGAGGTTGAAACTCTCTCAAAACAACGCCATAGGTTTGTGCTTAATCTAATGGGTGCTTGTCTTAACCCTCCTAATCATGCATGGGTTGTTACTGAGTATCTAAACACCACACTAAAGGAGTGGCTTCATGGTCCCGGCAAAAGGCGGAGAGACAGAATTGTGTCACTTCCTCCTCTAAAAGACAGAGTAATAAGGGCCTCGGAGATAGCCCAAGCTATGCAATATCTTCACGAACAAAAGCCCAAAATCATTCACCGTGACTTGAAGCCCAGCAATATTTTCTTAGACTTTGACTTGCATGTTAGAGTTGCTGATTTTGGACATGCTCGTTTCTTAGGGGATGGGGAATTGGCTCTCACTGGAGAAACAGGCAAGCttaattaa 1038 0.4345 MNTRNSPRPQKSLSRQSSKSNSRAKQEPLSPFSGGGCCRGFTSVKTVASTTSTLQQHQQIQQRNESLEVKVGDLEKEVQKQTELRVMYRKRMERTQDYLRYCLQIAQENGILEHIVQSKGELQHSPLSINNVSSITNSPQILTPTMHQHHPNLEAIIDQAKINGWYINPTEIQLDDKIGQGTTADIYRGAWRGFDVAVKCITPEFFRTNANGVEFFAQEVETLSKQRHRFVLNLMGACLNPPNHAWVVTEYLNTTLKEWLHGPGKRRRDRIVSLPPLKDRVIRASEIAQAMQYLHEQKPKIIHRDLKPSNIFLDFDLHVRVADFGHARFLGDGELALTGETGKLN 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00782 345 SMART serkin_6 172 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00782 345 Gene3D Transferase(Phosphotransferase) domain 1 253 342 - -
Tsu07g00782 345 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 35 342 - -
Tsu07g00782 345 SUPERFAMILY Protein kinase-like (PK-like) 148 335 IPR011009 -
Tsu07g00782 345 MobiDBLite consensus disorder prediction 1 28 - -
Tsu07g00782 345 ProSitePatterns Protein kinases ATP-binding region signature. 178 199 IPR017441 GO:0005524
Tsu07g00782 345 Gene3D Phosphorylase Kinase; domain 1 154 252 - -
Tsu07g00782 345 Pfam Protein kinase domain 174 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00782 345 ProSitePatterns Serine/Threonine protein kinases active-site signature. 301 313 IPR008271 GO:0004672|GO:0006468
Tsu07g00782 345 Coils Coil 57 84 - -
Tsu07g00782 345 MobiDBLite consensus disorder prediction 1 34 - -
Tsu07g00782 345 ProSiteProfiles Protein kinase domain profile. 172 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00782 345 PANTHER OS09G0443600 PROTEIN 35 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00782 Tsu-Chr7 6429212 6432023 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00782 165 342 MAP Kinase Kinase Kinase AT4G38470 36.313 2.08e-25 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Tsu07g00782 Pkinase 6.5e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00782 - - gmx:100810435 483.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00782 07 6429212 6432023 Tsu07g00782 07 6429212 6432023 ECH