Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00780 ATGGATGGTAATAATCATCAAGGTGGTGAAGTAAGCATGATGAAGAAAACAGAAGTGGTGGTGACAATTTCAAATAATGATCATGAGTTGAAAGTGTTTGAATCTTTGCCTCAATGTGAAAATGAACTTGCTTCAAAGTCACTACCAGTACCACCTTTAAACTGTGATTCTCCTGAAATAAGGTTCATCCCAAGCCCAAATAAGTCCCCAAAATATCCTGCTACAAATGAAAACCTTACACCAAGAAAAACTTTTGTAAGATCAGTGTATTCTAAGCCCAAATCAAGGTTTGGTgaacaaccttaccattttgaTGAAACCCTTTTAGAAGAGAATGTTACTTGTTTAAATTTACAAGAACAATTAGCTTTTAGGAACTCATTCAATAAAGAATCGCATTCACCTTTGACGGCATCTCAAAGTTCTTTTAGTGAGGATGAGGATCCTGATGAAATCATTTACAGGAAAGTTGAATTTAGTAAAGGCAAGCACAAGATACTACTAACGACTAAGGTTTTGATTGAATTGTCCGTGTTTGTCTGCATCGCGGGTAGCTTGTTGGCTAGCCTAATAGTTGAGGAACTGAGAAGGACAGAGATTTGGAGTTTAGGACTTTGGAGGTGGTGTATGCTTGTGTTGGTGACATTTTGTGGCATGTTGTTTACCAAATGGTTCATGCACATTGTTATTTTCTTGATTGAAATGAACTTCTTGTTGAGGAAAAAAGTGCTTTATTTTGTCCATGGAGTGAAGAAATGTGTTCAGGTTTTCATTTGGATCAGTTTGATTCTCCTCACAtggatattttttatcaatcaCGAGGTCCAACGATCTAAATTCGCTGCAAAATTTTTGAATGATGTAACATGGACTCTTGTTTCCCTTCTCATTGGATCatttttgtgggtcataaagaAATTCTTGCTAAAGACTTTGGCATTGAATTTCCATGTGAAGTCTTTCTTTGATCGAATTCAAGAATCGATCTTCCATCAATATGTTCTGCAGACTCTCTCTGGGCCTCCACTTATGGATGAGGCTGAGAAGGTTGGGGGATCACAGAGTATAGGCCATTTTAGTTTCAGGAGTACAACTGGTAAAGGCGGCATAAAGAAAGAGGTTATTGATATGGCAAAGCTACACAAGATGAAGCAAGAGAAAGTCTCCGCGTGGACTATGAAGATTTTGGTAGATGCAGTGATGAATTCAAGGCTGTCCACAATATCCAATTCACTAGATGAAAGTTTTTATGATGTCAAAAATGAACAAACTGATAAAGAAATTACTAATGAGATGGAAGCGACCGCGGCTGCCTATTATGTTTTCAAGAATGTTGCTGCTTCCCCTTGTTCCAAGGACATTGATGAGAATGAACTCCGTCGATTCATGATTAAAGAAGAAGTACCTTTGGTATTTCCCCTACTGGCGCAGGCAGAGACAGGGCTAATTACCAGAAAGTCTTTAGCAAATTGGGTGTTGAAGGTATATCAAGAACGTAGAGCACTCGCGCACGCCTTATGCGACACAAAAACAGCTgttaaacaattaaacaagCTCGTGACAGGAGTCCTAGTACTGGTGACCATAGTAGTGTGGCTTCTTCTAATGGAGATTGCAACCACAAAAGTACTTGTATTCCTCTCATCGCAGCTAGTACTTGCAGGTTTCATGTTTGGAAACACATGCAAGAATATATTTGAAGCAATCATCTTCGTGTTTGTAATGCATCCATTCGATGTTGGTGATCGGTGTGTTGTAGATGGTGTTGAGCTATTGGTTGAAGAAATGAATATAATGACAACAATATTCTTGAAGCTTAATAATGAAAAGGTCTATTATCCAAACTCTATCCTCGCCACAAAACCGATTAGCAATTATTACAGAAGTCCAAACATGGTTGATGGTGTAGAGTTTTCAATTGATTTTACGACACCAGCAGAGAAAATTGGAGCATTGAACGAAAAGATACAGAGGTACTTGGAGAGGAATCCACAATACTGGCATCCTAATTTTGGCTTGTTTGTGATAGAGATTGAAAATGTAAATAAGATTAAGATGGGTCTCTATGTTACTCACACAATGAACTTTCAAGATTTTGGGGAGAAGATCAAACGGAAAAGTGAATTAGTGATGGAAGTAAAGAGAATATTTGAAGAGCTCAATATCAGATACAACCTTCTTCCACAAAGTGTTCATCTCAGACACTTGGAATCTGATACAAGTTATCTCAAATGA 2235 0.3696 MDGNNHQGGEVSMMKKTEVVVTISNNDHELKVFESLPQCENELASKSLPVPPLNCDSPEIRFIPSPNKSPKYPATNENLTPRKTFVRSVYSKPKSRFGEQPYHFDETLLEENVTCLNLQEQLAFRNSFNKESHSPLTASQSSFSEDEDPDEIIYRKVEFSKGKHKILLTTKVLIELSVFVCIAGSLLASLIVEELRRTEIWSLGLWRWCMLVLVTFCGMLFTKWFMHIVIFLIEMNFLLRKKVLYFVHGVKKCVQVFIWISLILLTWIFFINHEVQRSKFAAKFLNDVTWTLVSLLIGSFLWVIKKFLLKTLALNFHVKSFFDRIQESIFHQYVLQTLSGPPLMDEAEKVGGSQSIGHFSFRSTTGKGGIKKEVIDMAKLHKMKQEKVSAWTMKILVDAVMNSRLSTISNSLDESFYDVKNEQTDKEITNEMEATAAAYYVFKNVAASPCSKDIDENELRRFMIKEEVPLVFPLLAQAETGLITRKSLANWVLKVYQERRALAHALCDTKTAVKQLNKLVTGVLVLVTIVVWLLLMEIATTKVLVFLSSQLVLAGFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVVDGVELLVEEMNIMTTIFLKLNNEKVYYPNSILATKPISNYYRSPNMVDGVEFSIDFTTPAEKIGALNEKIQRYLERNPQYWHPNFGLFVIEIENVNKIKMGLYVTHTMNFQDFGEKIKRKSELVMEVKRIFEELNIRYNLLPQSVHLRHLESDTSYLK 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00780 744 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 15 733 IPR016688 -
Tsu07g00780 744 Pfam Mechanosensitive ion channel 518 723 IPR006685 GO:0016020|GO:0055085
Tsu07g00780 744 PIRSF Memb_At2g17000 24 743 IPR016688 -
Tsu07g00780 744 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 9 15 733 - -
Tsu07g00780 744 SUPERFAMILY Sm-like ribonucleoproteins 567 626 IPR010920 -
Tsu07g00780 744 Gene3D - 577 626 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00780 Tsu-Chr7 6413313 6416068 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00780 50 733 Mechanosensitive Ion Channel Family AT5G12080 57.532 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00780 K22048 - gmx:100803107 1024.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00780 07 6413313 6416068 Tsu07g00780 07 6413313 6416068 ECH