Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00775 ATGGATGGTAATAAGCATCAAGGTGGTGAAGTAAGCATGATTGAGAAGAAAACAGGAGAAGTGGTGGTGCCAATTTCAAATGATCATGACCATGATCATGAGTTCAAAGGGATTGAATCTTCACCTCGTTACGCTTCAAAGTCACCGCCTTTTAACTGTGCTTCTCCTGAGATAAGATTCATTCCTAGCCCAAATAAGCCTCCAAAAATTCCTGCTACAAATGAAAACCTTACCCCAAGAAAAAATCTTGCAAGATCAGTGTATTCCAAGCCCAAATCAAGATTTGGTGAACAACCTTACACTATTGATGGAACCTTTTTAGAAGAGAATGTTACTTCACCACATAGGAACTCATCACATTCACCTAATAACAAATTTGGAACGGTTAATAGAACTGTTTCGATTACTTCTGTCGTCACTCCTAGAACACCTTTTTTGGCATCTCCAGGTCCTGCTGGTGAGGATCCTGATGAAATCATTTACAAGAAAGTTGAATTTAGTAAAGGCAAGCGTAAGAGATTAACGACTAAGGTTTTGATTGAATCGTTCGTGTTTGTGTGCATCGCGGGTAGCTTGTTGGCTAGTTTAACAGTTGAGGAACTAAGAAGGACACAAATTTGGAGTTTGGCGCTTTGGAGATGGTGTGTGCTTGTGATGGTGACATTTTGTGGCATGTTGGTTACTAAATGGTTCATGCACATTGTTGTTTTCTTGATTGAAATGAACTTCTTGTTGAAGAAAAAGGTGCTTTATTTTGTCCATGGATTGAAAAAATGTGTCCAGGTTTTCATTTGGATCGGTTTGGTTCTTCTCACATGGGTGCTTTTTATCAATCGCGGGGTCCAACGATCTAAGTTGGCAGCAAAGATTTTGGATGGTGTAACATGGACTCTTGTTTCACTTCTCATTGGAGCATTTTTGTGGCTCATAAAAACAACGTTGCTAAAGATTCTTGCATCGAATTTTCACGTGAAATCTTTCTTTGATCGAATTCAAGAATCGATCTTCCATCAGTATGTTCTGCAGACTCTCTCTGGGCCTCCACTTATGGAAGAGGCTGAGAAAGTCAACGGAACTCAAAGTATTAGCCATTTTAGTTTCAGGAGTACAACCAGTAAAGGTAGCACAAAGAAAGAGGTTATTGATATGGCAAAGCTTCATAGGATGAAGCAAGAGAAAGTTTCCTCGTGGACTATGAAGATTTTGGTAGATGCAGTGATGAATTCAAGGCTGTCCACAATCTCTAATTCACTTGATGAAACTTTTTATGACGTAGATAGCGAACAAAATGATAAAGAAATTACTAATGAGATGGAAGCAACTGCTGCTGCCTATTACGTTTTCAGGAATGTTGCTGCTTCCCCTAGCTGCAAGGACATCGATGAGGCTGAACTCCGTAGATTCCTGATTAAGGAAGAAGTTCCTTTGGTATTTCCCCTATTGGCACAGGCAGAAACTGGGCTAATTACCAGAAAATCTTTAGCAGATTGGGTGTTAAAGGTATATCAAGAACGTAAAGCACTGGCGCATGCATTAAGCGACACTAAAACAGCTgttaaacaattaaacaagCTTGTGACAGTGGTTCTAGTAGTGGTGACCATAGTAGTCTGGCTTCTTTTAATGGAGATTGCAACAACAAAAGTACTTGTATTCCTCTCATCGCAACTAGTACTTGCGGCTTTCATGTTTGGAAACACGTGCAAGAATATATTTGAAGCCATCATCTTCGTGTTTGTAATGCATCCGTTCGATGTTGGTGATCGGTGTGTTATAGATGGCATTGAGCTATTGGTTGAAGAAATGAATATATTGACAACAGTATTCTTGAAACTTAATAATGAAAAGGTCTATTATCCAAATTCTGTCCTGGCCGTAAAACCGATCAGCAATTATTACAGAAGCCCTAGTATGGGCGACAGTGTAGAGTTCGCGGTTGATTTTATGACACCAGCAGAGAAAATTGGAGCACTGAAAGAAAAAGTAAAGAGgtATTTGGAGAGAAATCCACAATATTGGTATCCTAATTTTGGTTTGGTAGTGAAGGAGATTGAAAATGTAAATAAGATTAAGATGGGTCTTTATGTTACTCACACAATGAACTTTCAAGAGTTTGGCGAGAAGACCAAGCGGAGAAGTGAACTAGTGATGGAagtaaagaaaatatttgaagagcTCAATATCAGATACAATCTTATTCCACAAGGTGTTCATCTAAGACACTTGGAACCTGATACAAGTTATCTCAAATGA 2253 0.3848 MDGNKHQGGEVSMIEKKTGEVVVPISNDHDHDHEFKGIESSPRYASKSPPFNCASPEIRFIPSPNKPPKIPATNENLTPRKNLARSVYSKPKSRFGEQPYTIDGTFLEENVTSPHRNSSHSPNNKFGTVNRTVSITSVVTPRTPFLASPGPAGEDPDEIIYKKVEFSKGKRKRLTTKVLIESFVFVCIAGSLLASLTVEELRRTQIWSLALWRWCVLVMVTFCGMLVTKWFMHIVVFLIEMNFLLKKKVLYFVHGLKKCVQVFIWIGLVLLTWVLFINRGVQRSKLAAKILDGVTWTLVSLLIGAFLWLIKTTLLKILASNFHVKSFFDRIQESIFHQYVLQTLSGPPLMEEAEKVNGTQSISHFSFRSTTSKGSTKKEVIDMAKLHRMKQEKVSSWTMKILVDAVMNSRLSTISNSLDETFYDVDSEQNDKEITNEMEATAAAYYVFRNVAASPSCKDIDEAELRRFLIKEEVPLVFPLLAQAETGLITRKSLADWVLKVYQERKALAHALSDTKTAVKQLNKLVTVVLVVVTIVVWLLLMEIATTKVLVFLSSQLVLAAFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVIDGIELLVEEMNILTTVFLKLNNEKVYYPNSVLAVKPISNYYRSPSMGDSVEFAVDFMTPAEKIGALKEKVKRYLERNPQYWYPNFGLVVKEIENVNKIKMGLYVTHTMNFQEFGEKTKRRSELVMEVKKIFEELNIRYNLIPQGVHLRHLEPDTSYLK 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00775 750 Pfam Mechanosensitive ion channel 523 729 IPR006685 GO:0016020|GO:0055085
Tsu07g00775 750 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 9 46 739 - -
Tsu07g00775 750 MobiDBLite consensus disorder prediction 26 50 - -
Tsu07g00775 750 PIRSF Memb_At2g17000 5 749 IPR016688 -
Tsu07g00775 750 SUPERFAMILY Sm-like ribonucleoproteins 573 632 IPR010920 -
Tsu07g00775 750 MobiDBLite consensus disorder prediction 26 40 - -
Tsu07g00775 750 Gene3D - 583 632 IPR023408 -
Tsu07g00775 750 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 46 739 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00775 Tsu-Chr7 6395106 6398025 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00775 23 739 Mechanosensitive Ion Channel Family AT5G12080 57.989 0.0 827
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00775 K22048 - gmx:100777617 1116.68