Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00769 ATGGCGACTCATCTGCTCAagctttctctcttctctccaCCTAACCTCTCTTTCACTTTCAATCATAACCATCACTTCATTTCTCTACTTCATACAAAACGACGTCGCATCAACCACAGCCGGAAAATTCTCCGCCAAAAATTCTCCATATCAAACTCCTTCGGTACTGAAATTCGCTCACCACAATCATCTCTTCTTCAACTCCAACCACAGATCAAAGACTCGCCGGTTCTTCTCGATGTAACCGGAATGATGTGCGGCGGTTGTGTCTCCCGAGTCAAAAACATTCTCTCCTCCGACGATCGAGTTGACTCAGTCGTAGTCAATATGTTGACTGAAACCGCTGCTATTAAGCTTAAACTGTTAGATGAAGAATCAACGAGTGTTGCTGAGAGTCTTGCTCGGAGATTGAGTGAATGTGGATTTCCGACTAAGAAGAGAGAGTCAGGTTTAGGAGTGGCGGAAAATGTGAGGAAGTGGAAGGAATTGgtgaagaagaaagaggaacttcTTGTTAAGAGTCGTAATCGCGTTGCTTTTGCTTGGACTTTGGTTGCATTGTGTTGTGGTTCTCACGCTTCacatatttttcattctttgGGGATTCACATTGGACATGGAACGTTTTTGGATATTCTTCATAATTCATACGTCAAAGGTGGTTTAGCTTTGGGCTCTCTATTGGGACCTGGAAGAGAGTTACTCTTTGATGGTTTTAATGCTTTTAAGAAAGGGTCGCCAAATATGAACTCTCTCGTGGGATTTGGTTCAATAGCTGCTTTCATCATCAGCTCGATTTCACTACTGAACCCCGAGCTGGCATGGGATGCGTCATTCTTTGATGAACCGGTCATGCTTCTTGGTTTCGTGCTTCTAGGACGTTCTCTGGAAGAAAAGGCAAGGATTCAGGCATCCAGTGATATGAATGAACTTCTTTCACTAATATCTACTCAGTCAAGACTTGTCATTACCTCATCAGAAGGTTCCCCATCTACTGACAGTGTGCTTAGCTCAGACTCAATTTGTGTGGAAGTTCCAACTGATGATATTCGAGTAGGAGACTCAGTGTTGGTGTTGCCTGGAGAAACTATTCCTATAGATGGAAGGGTCATTGCAGGAAGAAGCGTTGTGGACGAATCCATGCTTACAGGAGAATCACTTCCTGTATTTAAGGAGGAAGGCCTCACAGTTTCAGCAGGAACTATAAACTGGGATGGTCCTTTAAGGATTGAATCTTCTTCAACCGGCTCCAATACAATGATATCCAAGATTGTACGCATGGTCGAGGATGCTCAATCGCGTGAAGCACCTGTACAAAGGCTTGCAGATTCAATAGCAGGGCCATTTGTATTTAGTATAATGACTCTGTCAGCAGCAACATTTGCATTTTGGTATTTTATTGGAACACACATATTTCCTGATGTTTTGCTCAATGATATTGCTGGCCCGGAAGGAGATCCTCTGCTTTTGAGTTTAAAACTCTCTGTAGATGTTTTGGTTGTTTCTTGTCCTTGTGCTTTGGGTCTTGCCACACCAACAGCAATCCTAGTTGGCACCTCGCTTGGGGCAAGAAAAGGACTTCTTATCAGAGGAGGGGATGTGCTAGAACGCTTGGCCGGTGTAAATTATATCGCTCTAGACAAGACAGGAACCCTTACCAGAGGAAAACCAGTTGTTTCTGCCATAGGCTCTATTCATTATGGAGAGTCGGAAATTCTTCAGATTGCTGCAGCAGTGGAGAAAACTGCATCTCATCCTATAGCAAAGGCTATCATTAATAAAGCTGAGTCATTAGAGTTGGTCCTTCCACTCACAAAAGGACAGATAGTTGAACCAGGTTTTGGAACCTTGGCAGAAGTAGATGGGCGGTTGGTTGCAGTTGGGTCTTTAGAATGGGTTCATGAACGTTTCAAGACTAAAATGAACCCGTCTGATTTGATGAATCTTGAACATTCTTTGATGAATCATTCATCGAGTACATCTTCTTCGAAGTATTCGAAAACTGTTGTCTACGTTGGACGTGAAGGAGAAGGCATAATTGGTGTTATTGCCATATCTGACATTGTGCGTGAAGATGCTGAATCTACTGTAACAAGGCTCAAGAAGAAGGGGATTAAAACAGTCCTCTTATCAGGAGACAGGGAAGAGGCAGTTGCAACAATAGCAGAGACAGTTGGAATTGAAAATGATTTCGTCAAAGCATCCTTGTCTCCGCAGCAGAAATCTGCATTTATTTCATCTCTAAAAGCTGCTGGACATCATGTTGCGATGGTACCATGA 2280 0.4215 MATHLLKLSLFSPPNLSFTFNHNHHFISLLHTKRRRINHSRKILRQKFSISNSFGTEIRSPQSSLLQLQPQIKDSPVLLDVTGMMCGGCVSRVKNILSSDDRVDSVVVNMLTETAAIKLKLLDEESTSVAESLARRLSECGFPTKKRESGLGVAENVRKWKELVKKKEELLVKSRNRVAFAWTLVALCCGSHASHIFHSLGIHIGHGTFLDILHNSYVKGGLALGSLLGPGRELLFDGFNAFKKGSPNMNSLVGFGSIAAFIISSISLLNPELAWDASFFDEPVMLLGFVLLGRSLEEKARIQASSDMNELLSLISTQSRLVITSSEGSPSTDSVLSSDSICVEVPTDDIRVGDSVLVLPGETIPIDGRVIAGRSVVDESMLTGESLPVFKEEGLTVSAGTINWDGPLRIESSSTGSNTMISKIVRMVEDAQSREAPVQRLADSIAGPFVFSIMTLSAATFAFWYFIGTHIFPDVLLNDIAGPEGDPLLLSLKLSVDVLVVSCPCALGLATPTAILVGTSLGARKGLLIRGGDVLERLAGVNYIALDKTGTLTRGKPVVSAIGSIHYGESEILQIAAAVEKTASHPIAKAIINKAESLELVLPLTKGQIVEPGFGTLAEVDGRLVAVGSLEWVHERFKTKMNPSDLMNLEHSLMNHSSSTSSSKYSKTVVYVGREGEGIIGVIAISDIVREDAESTVTRLKKKGIKTVLLSGDREEAVATIAETVGIENDFVKASLSPQQKSAFISSLKAAGHHVAMVP 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00769 759 ProSiteProfiles Heavy-metal-associated domain profile. 76 146 IPR006121 GO:0046872
Tsu07g00769 759 Pfam E1-E2 ATPase 333 525 - -
Tsu07g00769 759 Gene3D - 556 689 IPR023299 GO:0000166
Tsu07g00769 759 CDD P-type_ATPase_HM 177 758 - -
Tsu07g00769 759 SUPERFAMILY Calcium ATPase, transmembrane domain M 281 539 IPR023298 -
Tsu07g00769 759 Pfam Heavy-metal-associated domain 79 142 IPR006121 GO:0046872
Tsu07g00769 759 CDD HMA 79 143 IPR006121 GO:0046872
Tsu07g00769 759 Gene3D - 301 432 - -
Tsu07g00769 759 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 249 758 IPR027256 GO:0006812|GO:0016021|GO:0019829
Tsu07g00769 759 PANTHER ATP7, ISOFORM B 62 758 - -
Tsu07g00769 759 ProSitePatterns E1-E2 ATPases phosphorylation site. 547 553 IPR018303 -
Tsu07g00769 759 Gene3D - 536 758 IPR023214 -
Tsu07g00769 759 PRINTS P-type cation-transporting ATPase superfamily signature 545 559 - -
Tsu07g00769 759 PRINTS P-type cation-transporting ATPase superfamily signature 681 692 - -
Tsu07g00769 759 PRINTS P-type cation-transporting ATPase superfamily signature 378 392 - -
Tsu07g00769 759 PRINTS P-type cation-transporting ATPase superfamily signature 703 713 - -
Tsu07g00769 759 SUPERFAMILY HAD-like 533 758 IPR036412 -
Tsu07g00769 759 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 336 758 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tsu07g00769 759 SUPERFAMILY HMA, heavy metal-associated domain 77 144 IPR036163 GO:0046872
Tsu07g00769 759 SUPERFAMILY Calcium ATPase, transduction domain A 338 428 IPR008250 -
Tsu07g00769 759 Pfam haloacid dehalogenase-like hydrolase 541 758 - -
Tsu07g00769 759 Gene3D - 70 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00769 Tsu-Chr7 6352236 6361664 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00769 239 758 Primary Pumps ATPases AT1G63440 35.206 3.00e-83 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00769 K17686 - gmx:100127402 1216.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00769 07 6352236 6361664 Tsu07g00769 07 6352236 6361664 ECH