Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00762 ATGAGTTCTAAAAAGATTACATGGAAGTCTATTGTCTTGATCTTAGGTTGTTACAAGACAAAATGTTCTTTGGAAGAAACAGAAAAAAGAGGTTTAAAACAAAGTTCTTTCCAAAGGGTATCTTTGTCTGATATAAGTAATTCTAGTTCTAGTCAAGCTATTGAAgatatttcaatttcttttgctGGCTCAAAGCTTTATACATTCACCTTAGAGGAGCTTAAAGAAGCAACAAATAATTTCTCATGGAGTAATTTGTTAGGTGAAGGTGGATTTGGACCTGTGTATAAGGGTTTTGTTGATGATAAACTCAGACGTGGTTTGAAGGCTCAACCTATTGCTGTTAAGAGACTCAACTTGGATGGCTCACAAGGTCATAGGGAATGGCTGgcAGAGATTATATTTCTTGGACAGCTTAGACATCCACATCTTGTCAAGCTAATTGGATATTGTTATGAGGAAGAGCAGAGGCTTTTGGTGTATGAATACATGGCAAGAGGAAGCTTGGAGAATCAATTATTCAGAAGATATTCTGCAACCTTACCATGGTCAACAAGAATGAAAGTTGCATTAGGTGCAGCTAAGGGACTAGCTTTTCTTCATGAAGCAGATAAACCTGTAATATATAGGGATTTCAAAAGTTCAAATATATTGCTGGATTCGGATTACACTGCTAAATTATCAGACCTTGGACTAGCTAAAGATGGTCCTGAAGGGGAAGAAACACATGTGACAACAACATGTATAATGGGAACTAAAGGCTATGCTGCTCCTGAGTATATCATGTCAGGTCACCTTTCTACAAAGAGTGATGTGTATAGCTATGGAGTAGTGTTATTGGAATTGCTTACAGGAAAGAGAGTAGTGGACAAGACCAGAACAAACAGAGAGAGACACCTTGTGGAATGGGCAAGACCTATTTTGAGAGATCAAAGAAAGCTGCCTCATATAATAGACTCAAGATTAGAGGGACAGTTTCCTATTAAAGGAGCTTTAAAGGTTGCAACATTGACTTATAAATGCTTGAGCCATCACCCTACTCCAAGGCCTAATATGAGTGATGTGGTAAAGACATTGGAATCACTTCAGGATTTTGATGATGTGTTCATAGGACCATTTGTGTATGTGGCTGTTAGTGAAAGTGACCAATGA 1152 0.3724 MSSKKITWKSIVLILGCYKTKCSLEETEKRGLKQSSFQRVSLSDISNSSSSQAIEDISISFAGSKLYTFTLEELKEATNNFSWSNLLGEGGFGPVYKGFVDDKLRRGLKAQPIAVKRLNLDGSQGHREWLAEIIFLGQLRHPHLVKLIGYCYEEEQRLLVYEYMARGSLENQLFRRYSATLPWSTRMKVALGAAKGLAFLHEADKPVIYRDFKSSNILLDSDYTAKLSDLGLAKDGPEGEETHVTTTCIMGTKGYAAPEYIMSGHLSTKSDVYSYGVVLLELLTGKRVVDKTRTNRERHLVEWARPILRDQRKLPHIIDSRLEGQFPIKGALKVATLTYKCLSHHPTPRPNMSDVVKTLESLQDFDDVFIGPFVYVAVSESDQ 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00762 383 Gene3D Transferase(Phosphotransferase) domain 1 164 369 - -
Tsu07g00762 383 PANTHER OS01G0588500 PROTEIN-RELATED 21 381 - -
Tsu07g00762 383 SUPERFAMILY Protein kinase-like (PK-like) 57 361 IPR011009 -
Tsu07g00762 383 PANTHER KINASE 1B 21 381 - -
Tsu07g00762 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Tsu07g00762 383 Pfam Protein tyrosine and serine/threonine kinase 84 359 IPR001245 GO:0004672|GO:0006468
Tsu07g00762 383 Gene3D Phosphorylase Kinase; domain 1 34 163 - -
Tsu07g00762 383 CDD STKc_IRAK 87 362 - -
Tsu07g00762 383 ProSiteProfiles Protein kinase domain profile. 81 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00762 Tsu-Chr7 6278843 6281460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00762 68 359 Glycoside Hydrolase AT3G07070 51.864 9.75e-100 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tsu07g00762 PK_Tyr_Ser-Thr 3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00762 - - gmx:100805771 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00762 07 6278843 6281460 Tsu07g00762 07 6278843 6281460 ECH
Tsu07g00762 07 6278843 6281460 Tsu01g00589 01 5171694 5174030 ECH
Tsu08g02291 08 31986480 31989504 Tsu07g00762 07 6278843 6281460 ECH
Tsu08g00665 08 7133753 7136455 Tsu07g00762 07 6278843 6281460 ECH