Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00751 ATGGATAATAATCAAGTCACCACTCATCAAGTTAATATTTCATCATCTTCTACTAATAATGATGATAAGAATAAGAAGAAGTTGTACAAAGGAGTAAGATTCAGAAAATGGGGAAAATGGGTGTGTGAAATAAGGCTACCAAATAGTCGTGAAAGAATATGGTTAGGATCATATGATTCAGCTGAAAAAGCAGCTAGAGCATTTGATGCTGCACTTTATTGTCTACGTGGTCCTAATGCAACTTTCAATTTCCCTGATACACCTTTCCATTTGGATATCAATGTGGCAAGAAACAATTCTCTTACTTCACAAGAGATTAGAGAGATTGCTGCTAATTTTGCCAACAAAAATTTACCAATTGTTattgataataataacaataacaatattaatattaatattaataatgatgGTAATGgtaatgttgatgttgatcaatCCAACATTGTGAAGGAAATTAGTGGCTCTTCATCTTCTACTATGTATGACAATGGGAACATGATTGATTGGACATTTTTGAACATGTTGGATGGTTCAAGTGATGTTGGGACTGATAATTATGGTGGTTTTTATTCCGACTTAGAGAAGATGCACTCGGGCGAGTTACTTTATTCCATTCCACCGCCACTTTTTGAGGATTATAATCATCAGAACGAAatagttgttgatgatgataacGATGATCCTTTTTCTCATCAGTCATTCCTTTGGAACTGGAACTTTTGA 726 0.314 MDNNQVTTHQVNISSSSTNNDDKNKKKLYKGVRFRKWGKWVCEIRLPNSRERIWLGSYDSAEKAARAFDAALYCLRGPNATFNFPDTPFHLDINVARNNSLTSQEIREIAANFANKNLPIVIDNNNNNNINININNDGNGNVDVDQSNIVKEISGSSSSTMYDNGNMIDWTFLNMLDGSSDVGTDNYGGFYSDLEKMHSGELLYSIPPPLFEDYNHQNEIVVDDDNDDPFSHQSFLWNWNF 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00751 241 MobiDBLite consensus disorder prediction 1 24 - -
Tsu07g00751 241 MobiDBLite consensus disorder prediction 1 19 - -
Tsu07g00751 241 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 13 241 - -
Tsu07g00751 241 CDD AP2 27 87 IPR001471 GO:0003700|GO:0006355
Tsu07g00751 241 PRINTS Ethylene responsive element binding protein signature 29 40 IPR001471 GO:0003700|GO:0006355
Tsu07g00751 241 PRINTS Ethylene responsive element binding protein signature 51 67 IPR001471 GO:0003700|GO:0006355
Tsu07g00751 241 Gene3D AP2/ERF domain 28 86 IPR036955 GO:0003700|GO:0006355
Tsu07g00751 241 ProSiteProfiles AP2/ERF domain profile. 28 85 IPR001471 GO:0003700|GO:0006355
Tsu07g00751 241 Pfam AP2 domain 29 77 IPR001471 GO:0003700|GO:0006355
Tsu07g00751 241 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF018 13 241 - -
Tsu07g00751 241 SUPERFAMILY DNA-binding domain 28 86 IPR016177 GO:0003677
Tsu07g00751 241 SMART rav1_2 28 91 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00751 Tsu-Chr7 6206758 6207686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00751 29 239 AP2-EREBP Transcription Factor Family AT1G19210 43.721 1.03e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tsu07g00751 AP2 5.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00751 - - mtr:MTR_3g105510 288.5