Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00741 ATGGAGAAAGAGAGTGTTGATGATATTATGGAAATTGAAGTCCTTCCTTCAATGTGGCCAGAAGATATTGGAACTGATGTCGGAAAACAGTTTAATATAGAAAAGCCGGGAAGTGACCAAGACATGTTAGAAGAAGTTACAATCATAGATGAAGTAACAACTATAGCCGATTTTAAGCGTCTAATTGAGTTAACAAATTTCACTGAAAAGGGTTCTTCTCAATTAGCATACCTTATGAAACATTGGGAGTATAAACAGGCGAATGTTGCGCGTCTTCTAAGAGAAGAACTCGACAATCTAAGCAAACAAAGACAAGATGTTGAGCTAAGGAAGTTGGAGATATTGGAAGAACATAGGTTCGAGGAAGAAAGATATGGAGGAGATAAACGACCGGTTTCTATATTAGACGATATTTATGATACATGGCAACAAGATGTACCTTGCAGAAAAAGTAAAGTTGTGGTTCAGAACAAGAGAATTGAAATTGATGCCGAGTATGATACTGTTGTGTACTGGAAACAGCGAGCGATGCATTTGGAAAAACTGCTTGAGGCAAGTATTCAGAGAGAAGAGACACTTGAACAAAAGCTGCAAGAAAGTATCAAGAATTTTGAAAGACAGTCATCACCTGTCGAAGAACTTTCGCAGATTTTGAAGAGAGCAGATAATTTCTTGCATTTTATACTACAAAATGCTCCTGTTGTTATTGGTCATCAAGACAAAGATTTGCGCTATCGCTTTATCTATAATCACTTTCCAAGTTTACACGAGGATgatataataggaaaaaCGGATGTCGAAATATTCACCGGATCTGGTGTTAAGGAGTCTCAAGAATTTAAGAAGGAAGTTTTGGAAAAAGGATTGCCTGCAAAAAGAGAAATCACTTTTGAGACAGAACTATTTGGATCAAAGACATTCTTGATTTATGTCGAACCTGTCTTCAGCAAGACAGGAGAAACAATTGGAATCAATTACATGGGAATGGATGTAACAGATCAGGTGAGAAAAAGAGAAAGGATGGCGAAGATTCGGGAAGAGATAGCTGTTCAGAAAGCAAAGGAATCAGAACTGAATAAAACCATTCACATTACAGAGGAAACTATGAGAGCGAAACAAGTGCTAGCAACAATGTCGCACGAGATAAGATCACCACTGTCTGGTGTTGTTAGCATGGCTGAAGTTCTTTCCACCACAAAACTTGATAGGGAACAAAGAGAGCTCTTGGATGTCATGTTATCGTCAGGAGATATGGTTCTTCAAATTATAAATGACACACTTGATCTTTCCAAGGTTGAATCAGGAGTTATGAAGTTGGAAGCTACCAAATTTCGTCCCAGGGAGGTAGTAAAGCATGTTCTTCAAACAGCTGCAGCATCATTGCAGAAAATATTAACCTTAGAAGGACACGTGGCAGATGATGTACCGATCGAGGTAATTGGTGATGTTTTAAGGATTCGACAAATCCTCACAAATTTAATCAGCAATGCCATCAAGTTTACACATGAAGGCAAAGTTGGGATAAACCTTTATGTTGTTCAAGAGCCAACTTTTACAAAAGCTGAAAGCATACAAAAGATTACTTCAGGCCATTCAACTATTCCTTTGAATgtaatgaaagaagaaaaatatggatTTAATGATGATTGTATATCTCCGGTTAAAAGTGAGTGCTCGATGAATGGAGACATGGACGATCAACATTCCTCAACTGAAACAACAGTCTGGATATGTTGCGATGTATATGATACAGGCATTGGAATACCAGAAAATGCAAGACATAGTTTATTTAAAAGGTACATGCAAGTCAGTGCAGACCACGCTCGAAAGTATGGCGGCACAGGGCTAGGATTAGCAATATGCAAACACCTGGTTGAATTGATGGGAGGTAGTCTTACAGTATCTAGCAAAGAACAGAATGGTTCAACATTCACATTCATACTCCCGTACAAGGTCTCGATCACTTGCGATAGTTCTGATTACTCAGACGAGCTCTCAGACATGGAGCATAACGATGCAGCTTCTGATGATACAACAACAGAAGGTTTCTTCCAATTCCAACCACCAACTTTAGGCTCACTATTCTCTTCTAATGGAACAAACAGAACTCATAACAAGTTATTGCCACACAAATTTAGCGGATTTTCTGATAGTTCTTTCTCATTTCCCTCTACTTCTAATGACATCATGTCAAAAGGAACATGTTCATTCGATGATTCGTCTTCAATAGTTGATGCTTCAGATGTGTCTGAATCAGCTAGTTCATCTAGTCACAGACATCATCTATATAATGCTCATGCATGGTTCCAGAATGGTAGCGCCGATTCTTCTCAGCATATGGTGGTAAACACAAGTACTAAATGTGTTACTAGCAGTAGTAAATCAGAAGTAACCAAATCcatatcaaaacctaagatacTTCTTGTTGAAGATAACAAGATTAACATCATGGTGACACAATCCATGATGAAGCAGTTAGGTCATAACATTGATGTTGTCACTAATGGAGCTGAAGCCGTGCGAGCAGTTCAACGCTGTACCTATGACCTAATTCTGATGGATGTGTGTATGCCAGTTATGGATGGTCTTCAAGCGACGAAACTGATTCGGTCTTCCGAGGAGACAGGCAATTGGGATGCTGCAAAACACGCTGGAATCGAGCAAAATGTACTCGATCGAGATCATGAATATCCCGATCCATCTACAAAACGAATTCCCATTGTTGCGATGACAGCAAATGCTTTGTCAGAGAGTGCTGAAGAATGTTTTGCCAATGGTATGGACTCATTTGTGTCAAAACCTGTGAGTTTACAAAAGTTGAAAGAGTGTATTGAACAATATTTAAGTTCAAGTCTCTTTCATCAAATATCGTTACCAAGACGGGAATTTGTCGCCATATTGAAGTACTTGGGTTATTGTTTAACCAAATATGTTTGTGCTGATATAGTACTTAGGAGTGCTAATAATGAAGCAATCCCTGCTAGGGTTAACAGAAAGTCCAAGACTGTTATTAGAGGAAATTTCTGTAGGCTCTTTGAACTATGGATTTTCTCTTCTTCAGTCACATTTAGGACTGCCCTTGAAATGTCAGCCCACAAGAGATGA 3105 0.3816 MEKESVDDIMEIEVLPSMWPEDIGTDVGKQFNIEKPGSDQDMLEEVTIIDEVTTIADFKRLIELTNFTEKGSSQLAYLMKHWEYKQANVARLLREELDNLSKQRQDVELRKLEILEEHRFEEERYGGDKRPVSILDDIYDTWQQDVPCRKSKVVVQNKRIEIDAEYDTVVYWKQRAMHLEKLLEASIQREETLEQKLQESIKNFERQSSPVEELSQILKRADNFLHFILQNAPVVIGHQDKDLRYRFIYNHFPSLHEDDIIGKTDVEIFTGSGVKESQEFKKEVLEKGLPAKREITFETELFGSKTFLIYVEPVFSKTGETIGINYMGMDVTDQVRKRERMAKIREEIAVQKAKESELNKTIHITEETMRAKQVLATMSHEIRSPLSGVVSMAEVLSTTKLDREQRELLDVMLSSGDMVLQIINDTLDLSKVESGVMKLEATKFRPREVVKHVLQTAAASLQKILTLEGHVADDVPIEVIGDVLRIRQILTNLISNAIKFTHEGKVGINLYVVQEPTFTKAESIQKITSGHSTIPLNVMKEEKYGFNDDCISPVKSECSMNGDMDDQHSSTETTVWICCDVYDTGIGIPENARHSLFKRYMQVSADHARKYGGTGLGLAICKHLVELMGGSLTVSSKEQNGSTFTFILPYKVSITCDSSDYSDELSDMEHNDAASDDTTTEGFFQFQPPTLGSLFSSNGTNRTHNKLLPHKFSGFSDSSFSFPSTSNDIMSKGTCSFDDSSSIVDASDVSESASSSSHRHHLYNAHAWFQNGSADSSQHMVVNTSTKCVTSSSKSEVTKSISKPKILLVEDNKINIMVTQSMMKQLGHNIDVVTNGAEAVRAVQRCTYDLILMDVCMPVMDGLQATKLIRSSEETGNWDAAKHAGIEQNVLDRDHEYPDPSTKRIPIVAMTANALSESAEECFANGMDSFVSKPVSLQKLKECIEQYLSSSLFHQISLPRREFVAILKYLGYCLTKYVCADIVLRSANNEAIPARVNRKSKTVIRGNFCRLFELWIFSSSVTFRTALEMSAHKR 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00741 1034 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 424 650 IPR036890 -
Tsu07g00741 1034 Pfam Response regulator receiver domain 806 874 IPR001789 GO:0000160
Tsu07g00741 1034 Gene3D - 357 435 - -
Tsu07g00741 1034 ProSiteProfiles Response regulatory domain profile. 805 948 IPR001789 GO:0000160
Tsu07g00741 1034 Pfam His Kinase A (phospho-acceptor) domain 373 435 IPR003661 GO:0000155|GO:0007165
Tsu07g00741 1034 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 481 650 IPR003594 -
Tsu07g00741 1034 CDD HisKA 369 431 IPR003661 GO:0000155|GO:0007165
Tsu07g00741 1034 SUPERFAMILY CheY-like 802 951 IPR011006 -
Tsu07g00741 1034 SMART HisKA_10 370 435 IPR003661 GO:0000155|GO:0007165
Tsu07g00741 1034 Coils Coil 90 117 - -
Tsu07g00741 1034 Gene3D PAS domain 211 347 - -
Tsu07g00741 1034 ProSiteProfiles Histidine kinase domain profile. 377 652 IPR005467 -
Tsu07g00741 1034 Coils Coil 176 207 - -
Tsu07g00741 1034 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 1 541 - -
Tsu07g00741 1034 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 370 435 IPR036097 GO:0000155|GO:0007165
Tsu07g00741 1034 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 561 949 - -
Tsu07g00741 1034 PANTHER TWO-COMPONENT HISTIDINE PROTEIN KINASE 561 949 - -
Tsu07g00741 1034 CDD REC_hyHK_CKI1_RcsC-like 806 944 - -
Tsu07g00741 1034 PANTHER HISTIDINE KINASE CYTOKININ RECEPTOR 1 541 - -
Tsu07g00741 1034 Gene3D - 436 655 IPR036890 -
Tsu07g00741 1034 PRINTS Bacterial sensor protein C-terminal signature 612 630 IPR004358 GO:0016310|GO:0016772
Tsu07g00741 1034 PRINTS Bacterial sensor protein C-terminal signature 577 591 IPR004358 GO:0016310|GO:0016772
Tsu07g00741 1034 PRINTS Bacterial sensor protein C-terminal signature 636 649 IPR004358 GO:0016310|GO:0016772
Tsu07g00741 1034 SMART HKATPase_4 481 652 IPR003594 -
Tsu07g00741 1034 SUPERFAMILY PYP-like sensor domain (PAS domain) 215 332 IPR035965 -
Tsu07g00741 1034 CDD HATPase_EvgS-ArcB-TorS-like 486 649 - -
Tsu07g00741 1034 Gene3D - 798 949 - -
Tsu07g00741 1034 SMART REC_2 804 944 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00741 Tsu-Chr7 6084694 6089508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00741 1 948 Histidine Kinase Gene Family AT5G10720 58.454 0.0 1096
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tsu07g00741 HATPase_c 7.3e-27 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00741 - - gmx:100811117 1417.52