Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00739 ATGAATAATTCCTCAATTCTGATATTCCTGGTTATAACTTGTTGTTGGTTTGTAAATATGTTGGGTGGAATGGCACAAACTAAAAATGAGAGTAATGTTGTAGTCAAAGTTGGAGCTGTACTTGATATTACCAATGGAACAGTTGGGAGAATAGGATTGAGCTGCATCAACATGGCACTCTCAGATTTTTATGAGTCTCATTCTCATTACAAAACTAGAATCCAAATCATTGTTAAGGATTCTCATAAAGACGTAGTTACTGCAGCTGCACACGCTCTGGATctcataaaaaatgaagaagtaCAAGCAATCATAGGACCAATAACAACAATGGAAGCAAATTTTGTAATTCAATTAGGAGACAAAGCACACATACCCATTGTAACATTTTCAGCAACAAGTCCTTCACTTGCATCACTTCAAAGtccatatttttttcaaatatcacAAATAGATTCAGCTCAAGTAAAAGCAATCACCTCAATTATTCAAGCTTTTGGTTGGAAACAAGTTGTCCCTATTTACATAGACAATAGTTTTGGTGAAGGACTCGTACCTTATTTAACCAATGTTCTTCAACAAGCCAATATCCAAATTCCTTATCTAAGTGCAATTTCTCTTACAGCCACAGATGATGGTATCACTCAAGAGCTTTATAAAATAATGACTACTATACCTGCTAGAGTATTTATTGTGCACATGACACCGAATCTTGGCTCTAAGCTATTTGCCATGgcaaaaaaaattgggatgaTGGGCcaaggctatgtttggatagTAACCGATAGTATGGCTAATTTGTTCAATTCATTGAATTTTAATGTATGGGAATCAATGGAAGGAGTAATTGGTGTGAGGACTTATATTCCTAGAACAAAAAAGCTAGATGATTTTAGAGTTAGATGGAAAAGAAAATTCATAAGTGACAATCCAACACTTGTTGACATGAATTTGAGCATTTTTGGAATATGGGCTTATGATGCTACAATTGCATTAGCAATGGCTATTGAGAAGGTTGGAATTGGAAACACAAAATTTGGCAACAATGAGAGCAACACATCAAGCAATTATTACATACCTAATTTTGAAAAGTTTGGTATTGCACAAAATGGTGAGAAATTGAGTGAAGCTTTGTCAAAAACTAGTTTTAATGGTCTTAGTGGTGATTTCAATGTTGTTGATGGGAAGTTACAAGCATCAGTATTTGAGATAATTAATGTGATTGGTAATGGAGAAAAGATGATTGGATTTTGGACACCGAATAATGGGTTGGCTAGAAATTTGGACACACATGACATGATGAATAATAGCACATATTCTAGTTCTAAAGATGATCTTGGATCAATCATATGGCCAGGGGATGTGTACTCCATTCCAAAGGGATGGGAAATTCCAACTATTGGGAAGAAGTTGAGAATAGGTGTTCCAGTTAAAAAAGGAGATAACTACATTGGATTCTTGAGAGTAACATATGATAATAGTACCAATAAAACAGATGCCATTGGATTCTCTATTGATATCTTCAAAGCTGTGGTCGATGTTTTGCCTTATGCCTTACCTTatgaattttttgaatttgcaaAGCCTAATGGTGAAATGGCGGGAAACTACAATGACTTAATCGCTCAAATTTATTATGGGAAGTATGATGCAGTAGTGGGGGATGTAACAATCACTGCAAACAGATCCAACTATGTTGATTTCACAATGCCATACACAGAATCTGGTGTATCAATGGTTGTTTCAACGAAAGATAGCCGGAAGAAAAATCCATGGGCTTTTTTGAAACCACTGACATGGGGTCTTTGGGTAACATCAGCTTGCTCATTTGTATTCATTGGATTTGTTGTATGGGTTCTTGAACATAGAGTAAACAATAACTTCAGAGGACCACCCTCTCATCAGATTGGCACAAGCTTATGGTTTTCCTTTTCAACTATGGTTTATGCTCATAGAGAGAAAGTGGTGAGCAACTTGGCTAGATTTGTGGTGGTTATATGGCTTTTTGTGGTTTTAATTCTAGTTCAAAGTTACACTGCAAGCTTGACTTCACTCTTAACAGTTGAACAACTAAGGCCAGCTATAACAGATGTTAACCAACTTCTAAAGAATAAGATGAATGTTGGCTATCCCAAAGGTGCTTTTGTTTATGGAATTTTGAGGAACTTGGGTTTCCCAGATTCTCAGCTCATTACATATCAATCACCTGAAGAATGTAATGAGCTTTTCATAAAAGGAAGTGTAAATGGTGGCATTGATGCTGCTTTTGATGAAGTTCCCTATGTTAAGCACTTTCTTGGAATTTATAGTTGTTCAAAATATGTCATGGTTGAACCTAGATTTAAAACTGGTGGTTTTGGCTATGCGTTTCCGAAAGGTTCACCTCTTGTAGCCGACATTTCTAGGGCAATACTAAATGTGACTCAGGGAGGCAAAATAAGAACAATTGAGAAGGCATGGTTCAAGGAAGCTATTTGTCTAGATTCTAATACAAAAATTTCTTCTAATAACAATCTTGGACTTGAAAGCTTTTGGGGACTGTTTCTCATAGCAGGAATTGCTTCCCTATTAGCACTCCTAATCTTTTTGGTGACCTTCCTATATCAGCACAGCCACATTTGGTTATACAATAATTCAAGTACTTCAATATGGCGACGATTTCTCGTCTTGGTAAGGATATTTGATCAAAGAGATCTGAATTGTCACACATtcaagaaaagtgaaaataaaaatgaaagcaGTAACAGTCCTTGTCATGATGATTTATATTCAGTTGAGGCATCTCCAGGCACACATTGTCCTCCTAGTCCATCTAGTCAAACTGAATCAAATTTTTCGGTTTATGGCGATTTTAGTATTAGTCCAAACACAGAAATGGATGATGTgcaaataattaataatcaagAAGTTGGTCCTGTGAACAACTGTGAAATTAACTCCGAAGCAACAGCCAACATGACCTCATCTACAATTGTAACATCCAGTTCCTAA 2991 0.3474 MNNSSILIFLVITCCWFVNMLGGMAQTKNESNVVVKVGAVLDITNGTVGRIGLSCINMALSDFYESHSHYKTRIQIIVKDSHKDVVTAAAHALDLIKNEEVQAIIGPITTMEANFVIQLGDKAHIPIVTFSATSPSLASLQSPYFFQISQIDSAQVKAITSIIQAFGWKQVVPIYIDNSFGEGLVPYLTNVLQQANIQIPYLSAISLTATDDGITQELYKIMTTIPARVFIVHMTPNLGSKLFAMAKKIGMMGQGYVWIVTDSMANLFNSLNFNVWESMEGVIGVRTYIPRTKKLDDFRVRWKRKFISDNPTLVDMNLSIFGIWAYDATIALAMAIEKVGIGNTKFGNNESNTSSNYYIPNFEKFGIAQNGEKLSEALSKTSFNGLSGDFNVVDGKLQASVFEIINVIGNGEKMIGFWTPNNGLARNLDTHDMMNNSTYSSSKDDLGSIIWPGDVYSIPKGWEIPTIGKKLRIGVPVKKGDNYIGFLRVTYDNSTNKTDAIGFSIDIFKAVVDVLPYALPYEFFEFAKPNGEMAGNYNDLIAQIYYGKYDAVVGDVTITANRSNYVDFTMPYTESGVSMVVSTKDSRKKNPWAFLKPLTWGLWVTSACSFVFIGFVVWVLEHRVNNNFRGPPSHQIGTSLWFSFSTMVYAHREKVVSNLARFVVVIWLFVVLILVQSYTASLTSLLTVEQLRPAITDVNQLLKNKMNVGYPKGAFVYGILRNLGFPDSQLITYQSPEECNELFIKGSVNGGIDAAFDEVPYVKHFLGIYSCSKYVMVEPRFKTGGFGYAFPKGSPLVADISRAILNVTQGGKIRTIEKAWFKEAICLDSNTKISSNNNLGLESFWGLFLIAGIASLLALLIFLVTFLYQHSHIWLYNNSSTSIWRRFLVLVRIFDQRDLNCHTFKKSENKNESSNSPCHDDLYSVEASPGTHCPPSPSSQTESNFSVYGDFSISPNTEMDDVQIINNQEVGPVNNCEINSEATANMTSSTIVTSSS 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00739 996 Gene3D - 471 590 - -
Tsu07g00739 996 Gene3D - 153 317 - -
Tsu07g00739 996 Gene3D - 367 470 - -
Tsu07g00739 996 SMART GluR_14 472 823 IPR001320 GO:0015276|GO:0016020
Tsu07g00739 996 Pfam Receptor family ligand binding region 55 409 IPR001828 -
Tsu07g00739 996 Pfam Bacterial extracellular solute-binding proteins, family 3 497 822 IPR001638 -
Tsu07g00739 996 SUPERFAMILY Periplasmic binding protein-like I 34 453 IPR028082 -
Tsu07g00739 996 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 35 923 - -
Tsu07g00739 996 PANTHER GLUTAMATE RECEPTOR 2.9 35 923 - -
Tsu07g00739 996 Gene3D - 591 712 - -
Tsu07g00739 996 PIRSF IGluLR_plant 1 951 IPR017103 -
Tsu07g00739 996 Gene3D - 721 824 - -
Tsu07g00739 996 Pfam Ligand-gated ion channel 823 854 IPR001320 GO:0015276|GO:0016020
Tsu07g00739 996 SUPERFAMILY Periplasmic binding protein-like II 448 823 - -
Tsu07g00739 996 CDD PBP1_GABAb_receptor_plant 36 428 IPR044440 -
Tsu07g00739 996 CDD GluR_Plant 469 821 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00739 Tsu-Chr7 6070055 6083133 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00739 2 969 Ion Channels AT2G29110 49.846 0.0 887
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00739 K05387 - tcc:18587654 1087.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00739 07 6070055 6083133 Tsu07g00739 07 6070055 6083133 ECH