Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00737 ATGGTGAAGATGGATAATCCCTCAATTCTGATATTCATGGTTACTTGTTTGTGTCTAAACCTATTGGGTGGAATGGCACAAATTCGCAACGAGAGTATTGTAGTGAAAGTTGGAGTTGTACTTGATGTTAGCGACGGAACGTTTGGGAAGATTGGATTGAGCTGCATCAACATGGCTCTCTCAGATTTCTATGACTCTCATTCTCATCACAAAACCAGAATCCAAATCATTGTCAGGGATTCTCGTAAGGACGTCGTTACTGCCGCCGCACACGCTTGGGATCTCATAAAAAATGAGGAAGTGCAAGCCATCATGGGACCAAGAACAACAATGGAAGCAAATTTTGTGATTCAATTAGGAGACAAAGCACATGTTCCCATTGTAACCTTTTCAGCAACAAGTCCTTCACTTGCATCACTTCAAAGtccatatttttttcaaatatcacAAATTGATTCAGCTCAAGTAAAAGCCATCACTTCAATTATCCTAGCTTTTGGTTGGAAACAAGTTGTCCCAATTTATATAGACAATAGTTTTGGTGAAGGACTCATACCTTATTTAACCAATGTTCTTCAACAAACCTATATCCAAGTTCCCTATCTAAGTGCAATTTCTCTTTCAGCCACTGATGATGATATCACTCAAGAGCTTTATAAAATAATGACTACTATATCCACTAGAGTATTTATTGTACACATGTCACCAAATCTAGGGTCAAAACTTTTTACCATagcaaaaaaaattgggatgaTGAGTCAAGGTTATGTTTGGATAGTAACCGATAGTATGACCAATTTATTCAATTCATTGGATGTTAAAGTGAGGGAATCAATGGAAGGAGTATTGGGTGTTAGGACTTATATTCCAGAAACAAAAAAGCTAGATGATTTTAGAGTTAGATGGAAAAGAAAATTCATAAGTGACAATCCAACACTTGTTGACACAAATTTGAACATTTTTGGTATATGGGCTTATGATGCTACAATTGCATTGGCAATGGCTATTGAGAAGGTTGGAATTGGAAACACAAAATTTGGCAACAATGAGAGCAATTATTATATGCCAAATTTTGAAAAGTTTGGTATTGCACAAAATGGTGAGAAATTGAGTGAAGCTTTGTCAAACACTAGCTTTAATGGTCTTAGTGGTGATTTCAAAGTTGTTGGTGGGAAGTTACAAGCATCAATATTTGAGATAGTTAATGTGATTGGTAATGGAGAAAAGAGGGTTGGATTTTGGACACCAGATAGAGGGTTGGCTAAAAAATTGGACACAAAAGGCCTAATGAGCAATCAAAACATATATTCTAGTTCTAAAAATGATCTTGGATCAATCATATGGCCAGGGGATGTGTACTCTATTTCAAAGGGATGGCAAATTCCTACTATTGGGAAGAAGTTGCAGATAGGAGTTCCAGTTAAAAGTGGAGATAACTACACTGAATTCTTGAAAGTAACATTTGATAATAATACCAATAAAACTTATGCCACTGGATTCTGCATTGATGTCTTCAAAGCTGTGTTGGATGTTTTGCCTTATGACTTACCATATGAATTTGTTCCATTTGCAAACCATGAGCATGAGATGGCAGGAACATACGATGAGTTAATCTCTCAACTTTTTCATGGGGAGTATGATGCAGTAGTGGGGGATGTAACAATCATTGCAAACAGATCAGAATATGTTGATTTCACAATGCCATACACAGAATCTGGTGTGACAATGGTTGTTTCAATGAAAGACAATAGGAAGAAATATGCATGGGCTTTTTTGAAGCCATTGACATGGCATCTTTGGGTAACATCAGCTTGTTCATTTGTATTCATTGGATTTGTTGTATGGGTTCTTGAACATAGAATTAACAACGATTTTAGGGGACCTCCCTCTCATCAGATTGGCACAAGCTTATGGTTTTCCTTCTCAACAATGGTCTATGCTCATAGAGAGAAAGTGGTGAGCAACTTGGCTAGATTTGTGGTGGTTGTATGGCTTTTTGTGGTTTTAATTCTGGTTCAAAGTTACACTGCAAGCTTGACTTCACTTTTAACGGTAGAACAACTAAAGCCATCTGTTACAGATGTTCACCAACTTCTAAAGAATAAGATGAATGTTGGTTATCTCAAAGGTTCTTTTGTTCATGAAATTTTGAAGAACTTGGGTTTCCAAGAATTTCAGCTCAAGACTTATGAATCACCTGAAGAATGTAATGAGCTTTTCATAAAAGGAAGTTTAAATGGTGGAATTGATGCTGCTTTTGATGAAGTTCCCTATGTTAAGCACTTCCTTGGAACTTATACTTGTTCAAAGTATGTTATGGTTGAACCAAGATTTAAAGCAGGTGGTTTTGGCTATGCTTTTCCAAAAGGTTCACCTCTTGTGGCTGACATTTCAAGGGCAATCCTAAATGTGACTCAAGGAGACAAAATGAAAACAATTGAGAACGCATGGTTCAAGGATGCTGTTTGTTTAGATTCTAATACAGAAATTTCCTCTAATAACAATCTTGGACTTGAAAGCTTTTGGGGACTGTTTCTTATAGCTGGGATTGCTTCTATATTAGCACTCTTAATCTTTGTGGTAACATTCCTATATCAGCACAAACATATTTGGTTAAACAATGATCCAAATATTTCAATATGGCAACGAGTATGCATTTTGGTAAGAATATTTGATCAAAGAGACTTGGACAGTCACACATTtaagaaaagtgaaaataaaattaaaagcagTAATAGTCCTCATCATGATGGTGACGACGATGATGATTTAGGTGCAGTTGAGGCATCTCCAGGTACACATTGTCCTCCTAGTCCATTTAGTCAAACTGAATCAAATGTTTCGATTTATGGCGATTTTAGTCCAAACACCGAAAAGGATGTTGTGCAAATTACTAATCAAGAAGCTGCTAGTGAATAG 2919 0.3583 MVKMDNPSILIFMVTCLCLNLLGGMAQIRNESIVVKVGVVLDVSDGTFGKIGLSCINMALSDFYDSHSHHKTRIQIIVRDSRKDVVTAAAHAWDLIKNEEVQAIMGPRTTMEANFVIQLGDKAHVPIVTFSATSPSLASLQSPYFFQISQIDSAQVKAITSIILAFGWKQVVPIYIDNSFGEGLIPYLTNVLQQTYIQVPYLSAISLSATDDDITQELYKIMTTISTRVFIVHMSPNLGSKLFTIAKKIGMMSQGYVWIVTDSMTNLFNSLDVKVRESMEGVLGVRTYIPETKKLDDFRVRWKRKFISDNPTLVDTNLNIFGIWAYDATIALAMAIEKVGIGNTKFGNNESNYYMPNFEKFGIAQNGEKLSEALSNTSFNGLSGDFKVVGGKLQASIFEIVNVIGNGEKRVGFWTPDRGLAKKLDTKGLMSNQNIYSSSKNDLGSIIWPGDVYSISKGWQIPTIGKKLQIGVPVKSGDNYTEFLKVTFDNNTNKTYATGFCIDVFKAVLDVLPYDLPYEFVPFANHEHEMAGTYDELISQLFHGEYDAVVGDVTIIANRSEYVDFTMPYTESGVTMVVSMKDNRKKYAWAFLKPLTWHLWVTSACSFVFIGFVVWVLEHRINNDFRGPPSHQIGTSLWFSFSTMVYAHREKVVSNLARFVVVVWLFVVLILVQSYTASLTSLLTVEQLKPSVTDVHQLLKNKMNVGYLKGSFVHEILKNLGFQEFQLKTYESPEECNELFIKGSLNGGIDAAFDEVPYVKHFLGTYTCSKYVMVEPRFKAGGFGYAFPKGSPLVADISRAILNVTQGDKMKTIENAWFKDAVCLDSNTEISSNNNLGLESFWGLFLIAGIASILALLIFVVTFLYQHKHIWLNNDPNISIWQRVCILVRIFDQRDLDSHTFKKSENKIKSSNSPHHDGDDDDDLGAVEASPGTHCPPSPFSQTESNVSIYGDFSPNTEKDVVQITNQEAASE 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00737 972 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 35 916 - -
Tsu07g00737 972 PANTHER GLUTAMATE RECEPTOR 2.9 35 916 - -
Tsu07g00737 972 MobiDBLite consensus disorder prediction 935 972 - -
Tsu07g00737 972 CDD GluR_Plant 466 818 - -
Tsu07g00737 972 Pfam Bacterial extracellular solute-binding proteins, family 3 494 819 IPR001638 -
Tsu07g00737 972 PIRSF IGluLR_plant 3 948 IPR017103 -
Tsu07g00737 972 MobiDBLite consensus disorder prediction 904 972 - -
Tsu07g00737 972 CDD PBP1_GABAb_receptor_plant 45 424 IPR044440 -
Tsu07g00737 972 Gene3D - 363 467 - -
Tsu07g00737 972 SUPERFAMILY Periplasmic binding protein-like I 35 450 IPR028082 -
Tsu07g00737 972 Pfam Ligand-gated ion channel 820 851 IPR001320 GO:0015276|GO:0016020
Tsu07g00737 972 Gene3D - 31 160 - -
Tsu07g00737 972 Gene3D - 589 728 - -
Tsu07g00737 972 Gene3D - 161 339 - -
Tsu07g00737 972 Pfam Receptor family ligand binding region 55 405 IPR001828 -
Tsu07g00737 972 Gene3D - 468 588 - -
Tsu07g00737 972 SUPERFAMILY Periplasmic binding protein-like II 445 820 - -
Tsu07g00737 972 SMART GluR_14 469 820 IPR001320 GO:0015276|GO:0016020
Tsu07g00737 972 MobiDBLite consensus disorder prediction 904 922 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00737 Tsu-Chr7 6026732 6032949 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00737 3 918 Ion Channels AT2G29120 50.648 0.0 899
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00737 K05387 - tcc:18587654 1100.89