Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00736 ATGATGAAGTATAATCCAATTAGCTTTGTTTACTTTGTGATATTTATGGTTACTTGTTCGTGTGTTTTGTTTGGTGGAATGGCACAAATTAGAAATGAGAGTAGTGTTGTAGTCAAAGTTGGAGCTATACTTGATGTTAGCAATGGAACAGTTGGGATAATAGGATTGAGTTGCATCAACATGGCTCTTTCAGATTTCTATGACTCCCATTCTCATTACAAAACTAGAATCCTAATTATTCTCAGAGATTCTCATAAGGATGTCGTCACTGCCGGCGCACATGCTTTGGATCTCATAAAGAATGAGGAAGTACAAGCAATCATGGgaccaacaacaacaatggaAGCAAATTTTGTGATTCAATTAGGAGACAAAGCACATGTTCCCATTGTAACCTTTTCAGCAACAAGCCCTTCACTAGCATCACTTCAAAGTCCATATTTTTTCCAAATATCACAAATTGATTCAGCTCAAGTAAAAGCCATAACCTCAATCATCCAAGCTTTTGGTTGGAAACAAGTTGTCCCCATTTACATAGACAATAGTTTTGGTGAAGGACTTGTACATTATTTAGCCAATGTTCTTGAGCAAGCAAATATCCAAGTTCCCTATCTAAGTGCAATTTCTCTTTCAGCCACAGATGATGCTATCACTCAAGAACTTTATAAAATAATGACTACTAGACCCACTAGAGTATATATTGTGCACATGTCACCAAATCTTGGCTCTAAGCTTTTTACCTTGgcaaaaaaaattgggatgaTGGGTcaaggctatgtttggatagTAACTGATAGTATGACTAATTTGTTCAattcattaaattttaatgtgtGGGAATCAATGGAAGGAGTAATCGGTGTTAGGACTTATattccaaaaacaaaaaggCTACATGATTTTAGAGTTAGATGGAAAAGAAAATTCATAAGTGACAATCCAACACTTGTTGACACAAAATTCAACATATTTGGAATTTGGGCTTATGATGCTACAACTGCATTAGCAATGGCAATCGAGAAGGTTGGAATTCGAAACACAAAATTTGGCTACAATGAGAACAATACATCAAGCAATTATTATATGCCAAATTTTGAAAAGTTTGGTATTGCACAAAATGGTGAGAAATTGAGTGAAGCTTTGTCAAACACTAGCTTTAATGGTCTTAGTGGTGATTTCAATGTTGTTGATGGGAAGTTACAAGCATCAATATTTGAGATAATTAATGTGATTGGTAATGGAGAAAAGAGAGTTGGATTTTGGACACCAAATAAAGGGTTGGCTAGAAATTTGGACACAAAGGGTCTAATGTTCAATAATAGCATACTATATTCTAGTTCTAAAAATGATCTTGGATCAATCATATGGCCAGGGGATATGTACTCTAATCCTCCTATTTGGAAGAAGCTGAAGATAGGAGTTCCAGTTAGACATCCAGATAACTACCCTGAATTATTGAAAGTAACATATGATCATAGTACCAATAAAACACAAGCCACTGGCTTCTGCATTGATGTATTCAGAGCTGCCGTGGATATTTTGCCGTATAATATACAATATGAATTTTTTCAATATGCAAAGCCCGATGGTGAAATGGCAGGAACAAACGATGAGTTGATCACTCAACTTTATCATGGGAAGTATGATGCAGTGGTGGGGGATATATCAATCATTGCAAACAGATCCAACTATGTTGATTTCACAATGCCATACACTGAATCTGGTGTGACAATGGTTGTTTCAACGAAAGACaatatgaagaaaaatgcaTGGGCTTTTTTGAAGCCACTGACATGGGATCTTTGGGTAGCATCGGCTTGTTCATTTGTATTCATTGGATTTGTTGTATGGAACCTTGAACATAAAATAAACGATGACTTCCGAGGACCGCCCTCTTATCAGATTGGCACAATTTTATGGTTTTCCTTTTCAACTATGGTCTATGCTCATAGAGAGAAAGTGGTGAGCAACTTGACTAGATTTGTAGTGGTTGTTTGGCTTTTTGTGGTTCTAATTTTGGTTCAAAGTTACACTGCAAGCTTGACTTCATTGTTAACAGTTGAACAACTAAGTCCAACAATTACAGATGTTAACCAACTTCTAAAGAATAAAATGAATGTTGGTTATCTCAAAGGTTCTTTTGTTTACGGAATTTTGAAGAACTTGGGTTTCCCAGACTCTCAACTCATTACTTATCAATCACCTAAAGAATGGCACGAGCTTTTCATAAAAGGAAGTGTAAATGGTGGCATTGATGCTGCTTTTGATGAAGTTGCCTATGTTAAGAACTTTCTTAGAACTTATAGTTGTTCAAAGTATGTCATGGTTGAACCAAGATTTAAAACCGGTGGTTTTGGCTATGCATTTCCAAAAGGATCACCTCTTGTAGCTGACATTTCAAGGGCAATCCTAAATGTGACAGAGGGAGGCAAAATGAGAACAATTGAGAAAGCATGGTTCAATGAACCTAGTTGTTCAGATTCTAATACAAAATTTTCCTCTAATAACAATCTTGGACTTGAAAGTTTTTGGGGGCTGTTTCTCATAGCTGGGATTGCTTCCATATTAGCACTACTATTTTTTTGGGTGCCCTTCCTATATGAGCACAAACACATTTGGGTACACAGTAATTTAAGTACCTCAATATGGGGACGAATTCGCATCTTGATAAAGATATTTGATCAAAGAGACTTGAATTATTATACATtcaagaaaagtgaaaataaaagtaaaattagtACCAGTCTTCATCATGATGATGATTTAGGTGCAGTTGATGCCTCTCCAGGTACACATTGTCCTCCTAGTCCATCTAGTCAAACTGAATCAAATGTTTCGGTTTATGGAGAATTTAGTCCAAACACTGAAATAGATGTTGTACAAATTATTAATCAAGAAGTTGCTCCTGTGACAACAATGAAATTAACTAGCAAAAGAGATGTACATTTACATAGGTCTTGA 2961 0.3448 MMKYNPISFVYFVIFMVTCSCVLFGGMAQIRNESSVVVKVGAILDVSNGTVGIIGLSCINMALSDFYDSHSHYKTRILIILRDSHKDVVTAGAHALDLIKNEEVQAIMGPTTTMEANFVIQLGDKAHVPIVTFSATSPSLASLQSPYFFQISQIDSAQVKAITSIIQAFGWKQVVPIYIDNSFGEGLVHYLANVLEQANIQVPYLSAISLSATDDAITQELYKIMTTRPTRVYIVHMSPNLGSKLFTLAKKIGMMGQGYVWIVTDSMTNLFNSLNFNVWESMEGVIGVRTYIPKTKRLHDFRVRWKRKFISDNPTLVDTKFNIFGIWAYDATTALAMAIEKVGIRNTKFGYNENNTSSNYYMPNFEKFGIAQNGEKLSEALSNTSFNGLSGDFNVVDGKLQASIFEIINVIGNGEKRVGFWTPNKGLARNLDTKGLMFNNSILYSSSKNDLGSIIWPGDMYSNPPIWKKLKIGVPVRHPDNYPELLKVTYDHSTNKTQATGFCIDVFRAAVDILPYNIQYEFFQYAKPDGEMAGTNDELITQLYHGKYDAVVGDISIIANRSNYVDFTMPYTESGVTMVVSTKDNMKKNAWAFLKPLTWDLWVASACSFVFIGFVVWNLEHKINDDFRGPPSYQIGTILWFSFSTMVYAHREKVVSNLTRFVVVVWLFVVLILVQSYTASLTSLLTVEQLSPTITDVNQLLKNKMNVGYLKGSFVYGILKNLGFPDSQLITYQSPKEWHELFIKGSVNGGIDAAFDEVAYVKNFLRTYSCSKYVMVEPRFKTGGFGYAFPKGSPLVADISRAILNVTEGGKMRTIEKAWFNEPSCSDSNTKFSSNNNLGLESFWGLFLIAGIASILALLFFWVPFLYEHKHIWVHSNLSTSIWGRIRILIKIFDQRDLNYYTFKKSENKSKISTSLHHDDDLGAVDASPGTHCPPSPSSQTESNVSVYGEFSPNTEIDVVQIINQEVAPVTTMKLTSKRDVHLHRS 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00736 986 Gene3D - 474 590 - -
Tsu07g00736 986 CDD PBP1_GABAb_receptor_plant 39 431 IPR044440 -
Tsu07g00736 986 Gene3D - 591 720 - -
Tsu07g00736 986 PIRSF IGluLR_plant 5 954 IPR017103 -
Tsu07g00736 986 Gene3D - 154 427 - -
Tsu07g00736 986 Gene3D - 73 402 - -
Tsu07g00736 986 SUPERFAMILY Periplasmic binding protein-like I 37 458 IPR028082 -
Tsu07g00736 986 SMART GluR_14 471 822 IPR001320 GO:0015276|GO:0016020
Tsu07g00736 986 Pfam Bacterial extracellular solute-binding proteins, family 3 496 821 IPR001638 -
Tsu07g00736 986 Pfam Receptor family ligand binding region 58 412 IPR001828 -
Tsu07g00736 986 PANTHER GLUTAMATE RECEPTOR 2.9 38 917 - -
Tsu07g00736 986 CDD GluR_Plant 468 820 - -
Tsu07g00736 986 SUPERFAMILY Periplasmic binding protein-like II 468 823 - -
Tsu07g00736 986 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 38 917 - -
Tsu07g00736 986 MobiDBLite consensus disorder prediction 932 946 - -
Tsu07g00736 986 MobiDBLite consensus disorder prediction 926 946 - -
Tsu07g00736 986 Pfam Ligand-gated ion channel 822 853 IPR001320 GO:0015276|GO:0016020
Tsu07g00736 986 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00736 Tsu-Chr7 6019554 6024025 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00736 3 942 Ion Channels AT2G29120 46.947 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00736 K05387 - tcc:18587654 1055.82