Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00735 ATGATGAAGAAGGATAATCCAATTAGCTTTGTTTACTTTGTGATATTCATGGTTACTTGTTTGTGTGTAAATAATGGAATATTGGCACAAAGAAATGTGACAGTGGTGAAAGTTGGAGCTGTACTTGATCTTAGCAATGGAACTAATGCTGCTGGGATTATAGGATTGAGCTGCATCAACATGGCCCTTTCAGATTTCTATAACTCTCATTCTCATTACGAAACTAGAATCAAAATCATCCTTAGGGATTCTAATAAGGATGTCGTCATGGCTGGCGCACACGCTTTGGACCTCATAAAGAATGAAGAAGTACAAGCAATCATGGgaccaacaacaacaatggaAGCAAATTTTATGATTCAATTAGGAGACAAAGCACACATACCCATTGTAACATTTTCTGCAACAAGCCCTTCACTAGCATCATTTCAAAGTCCATACTTTTTCCAAATATCACAAAATGATTCAGCTCAAGTAAAAGCCATTACCTCAATTATACTAGCTTTTGGTTGGAAACAAGTTGTCCCCATTTACATAGACAATAGTTTTGGTGAAGGACTTGTACATTATTTAGCCAATGTTCTTCAAGAAGCCAATATCCAAGTTCCCTATCTAAGTGCAATTTCTCTTTCAGCCACAGATGATGCTATTACTAGAGAGCTTTATAAAATAATGACTACTATACCCACTAGGGCATATATTGTGCACATGTCACCAAATCTTGGCTCTAAGTTTTTTATGTtggcaaaaaaaattggaatgatGGGTcaaggctatgtttggatagTAACTGATAGTATGGCTAATTTGTTCAATTCATTGAATTTTAATGTACGGGAATCAATGGAAGGAGTAATTGGTGTGAGGACTCATATTCCTAGAACAAAAAAGCTAGATGATTTTAGAGTTAGATGGAAAAGAAAATTCATAAGTGACAATCCAACACTcctaaacacaaaatttaacatttttggAATTTGGGCGTACGATGCTACAACTGCATTAGCGATGGCTATCGAGAAGGTTGGAATTGGAAACACAAAATTTGGTTACAATGAGAGCAACACATCAAGCAATTATTATATGCCTAATTTTGAAAAGTTTGGTATTGCACAAAACGGTGAGAAATTGAGGGATGCTTTGTCAAACACTAGCTTTAACGGTCTTAGTGGTGATTTCAATGTTGTTGATGGGCAGTTACAAACATCAATATTTGAGATAATTAATGTGATTGGTAATGGAGAAAAGAGGGTTGGATTTTGGACACCAAATAGAGGGTTGGCTAAAAGTTTGGACACACATGACATGATGAATAATAGCACATATTCAAGTTCTAAAAATGATCTTGGATCAATCATATGGCCAGGGGATATCTACTCTATTCCTCCTATTTGGAAGAAGCTAAAAATAGGAGTTCCAGCTAGAAATGCAAATAACTACCCTGAATTCTTGAGAGTAATATATGACAATAGTACCAATAAAACACAAGCCACTGGCTTCTGCATTGATATCTTCAAAGCTGCAGTGAATATTTTGCCTTATAAATTGCAATATGAGTTTTTTCAATATGCAAAGCCAGATGGTGAGATGGCAGGAACATACGATGAGTTGATCACTCAACTTTATCATGGGACGTATGATGCAGTAGTGGGGGATGTAACAATCATTGCAAATAGATCCAACTATGTTGATTTCACAATGCCATACACAGAAGCTGGTGTAACAATGGTTGTTTCAATGAAAGACAATAGGAAGAAAAATGCATGGACTTTTTTGAAGCCACTGACATGGGATCTTTGGGTAACATCAGTTTGTTCTTTTGTATTCATTGGATTTGTTGTATGGAACCTTGAACATAGAATAAACGATGACTTCCGAGGACCACCTTCTTATCAGATTGGCACAAGTTTATGGTTTTCCTTCTCAACTATGGTCTATGCTCATAGAGAGAAAGTGGTGAGCAACTTGACTAGATTTGTAGTGGTTGTTTGGGTTTTTGTGGTTCTAATTTTGGTTCAAAGTTACACTGCAAGCTTGACTTCAATGTTAACAATTGAACAATTAAGTCCAACAATTACAGATGTTAACCAACTTCTAAAGAATAAGATGAATGTTGGCTATCCCATAGGTTCTTATGTTCGTGGAATTGTGAAGAACTTAGGTTTCTCAGATTCTCAGCTCATTGCTTATCAATCACCTAAAGAATTTCATGAGCTTTTCATAAAAGGAAGTGTAAATGGAGGTATTGATGCTGCTTTTGAAGAAGTTGCCTATGTTAAGCACTTTCTTAGAACTTATAGTTGTTCAAAGTATGTCATGGTTGAACCAAGATTTAAAACCGGTGGTTTTGGCTATGCGTTTCCAAAAGGATCACCTCTTGTAGCTGACATTTCAAGGGCAATCCTAAATGTGACAGAGGGAGGCAAAATGAGAACAATTGAAAATGTATGGTTCAATGAACCAAGTTGTCCAGATTCTAATACAAAAGTTTCCACTAATAGCAATCTTGGACTTGAAAGCTTTTGGGGGCTGTTTCTGATAGCAGGGATTGCTTCCATATTAGCACTACTATTCTTTTGGGTGCCCTTCCTATATCGGCACAAACAAATTTGgctacaaaataatttaagtaCTTCAGTATGGCGACGGATTTGCATCTTGGTAAAGATATTTGATCAAAGAGACTTGCACTGTTGCACATtcaagaaaagtgaaaataaaaacgaaaatagtaCCAGTCCTCATCATGATGATGATTTAGGTGCAGTTGAGGCATCTCCAGATACACATTGTCCTCCTAGTCCATCTAGTCAAACTGAATCAAATGTTTCGGTTTATGGCGATTTTAGTCCAAACACAGAATTGAGTGTTGTACAAATTGCTAATCAAGAAGTTGCTTCTGTGAATAGCTGTGAAATTAACTCCCAAGCAACATGA 2937 0.3504 MMKKDNPISFVYFVIFMVTCLCVNNGILAQRNVTVVKVGAVLDLSNGTNAAGIIGLSCINMALSDFYNSHSHYETRIKIILRDSNKDVVMAGAHALDLIKNEEVQAIMGPTTTMEANFMIQLGDKAHIPIVTFSATSPSLASFQSPYFFQISQNDSAQVKAITSIILAFGWKQVVPIYIDNSFGEGLVHYLANVLQEANIQVPYLSAISLSATDDAITRELYKIMTTIPTRAYIVHMSPNLGSKFFMLAKKIGMMGQGYVWIVTDSMANLFNSLNFNVRESMEGVIGVRTHIPRTKKLDDFRVRWKRKFISDNPTLLNTKFNIFGIWAYDATTALAMAIEKVGIGNTKFGYNESNTSSNYYMPNFEKFGIAQNGEKLRDALSNTSFNGLSGDFNVVDGQLQTSIFEIINVIGNGEKRVGFWTPNRGLAKSLDTHDMMNNSTYSSSKNDLGSIIWPGDIYSIPPIWKKLKIGVPARNANNYPEFLRVIYDNSTNKTQATGFCIDIFKAAVNILPYKLQYEFFQYAKPDGEMAGTYDELITQLYHGTYDAVVGDVTIIANRSNYVDFTMPYTEAGVTMVVSMKDNRKKNAWTFLKPLTWDLWVTSVCSFVFIGFVVWNLEHRINDDFRGPPSYQIGTSLWFSFSTMVYAHREKVVSNLTRFVVVVWVFVVLILVQSYTASLTSMLTIEQLSPTITDVNQLLKNKMNVGYPIGSYVRGIVKNLGFSDSQLIAYQSPKEFHELFIKGSVNGGIDAAFEEVAYVKHFLRTYSCSKYVMVEPRFKTGGFGYAFPKGSPLVADISRAILNVTEGGKMRTIENVWFNEPSCPDSNTKVSTNSNLGLESFWGLFLIAGIASILALLFFWVPFLYRHKQIWLQNNLSTSVWRRICILVKIFDQRDLHCCTFKKSENKNENSTSPHHDDDLGAVEASPDTHCPPSPSSQTESNVSVYGDFSPNTELSVVQIANQEVASVNSCEINSQAT 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00735 978 CDD GluR_Plant 466 818 - -
Tsu07g00735 978 Gene3D - 60 402 - -
Tsu07g00735 978 MobiDBLite consensus disorder prediction 905 924 - -
Tsu07g00735 978 SMART GluR_14 469 820 IPR001320 GO:0015276|GO:0016020
Tsu07g00735 978 CDD PBP1_GABAb_receptor_plant 37 431 IPR044440 -
Tsu07g00735 978 MobiDBLite consensus disorder prediction 905 947 - -
Tsu07g00735 978 Gene3D - 588 711 - -
Tsu07g00735 978 PIRSF IGluLR_plant 5 957 IPR017103 -
Tsu07g00735 978 SUPERFAMILY Periplasmic binding protein-like II 466 821 - -
Tsu07g00735 978 Pfam Ligand-gated ion channel 820 851 IPR001320 GO:0015276|GO:0016020
Tsu07g00735 978 Gene3D - 154 427 - -
Tsu07g00735 978 SUPERFAMILY Periplasmic binding protein-like I 34 422 IPR028082 -
Tsu07g00735 978 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 36 915 - -
Tsu07g00735 978 Pfam Bacterial extracellular solute-binding proteins, family 3 494 819 IPR001638 -
Tsu07g00735 978 Gene3D - 466 587 - -
Tsu07g00735 978 PANTHER GLUTAMATE RECEPTOR 2.9 36 915 - -
Tsu07g00735 978 MobiDBLite consensus disorder prediction 930 947 - -
Tsu07g00735 978 Pfam Receptor family ligand binding region 58 412 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00735 Tsu-Chr7 6014034 6018285 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00735 2 972 Ion Channels AT2G29120 47.094 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00735 K05387 - tcc:18587654 1046.96