Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00728 ATGGGATATTTCAATTCTGCTTTGTCATCTTCAAGTCAGGCTAAAGATGATGCACCGGTTAGCGGCGGCGGTCTTAGTCACAATGGAAAGTTTAGCTATGGGTATGCTAGCTCGGCTGGCAAGAGATCTTCAATGGAAGATTTTTATGACACAAGAATTGACGGTGTTGATGGTGAAACCGTTGGCCTTTTCGGAGTCTTTGATGGTCACGGTGGTATTCGTGCTGCTGAGTATGTTAAGAAAAACTTGTTTAGTAATTTGATCAGTCACCCAAAATTCATTTCTGACACCAAATCAGCAATATCTGATGCATATAATCATACCGACAATGAATATCTGAAATCAGAAAACAATCATCACAAAGATGCAGGATCTACTGCATCTACTGCCATTCTAGTTGGTGATCGTTTGCTTGTTGCAAATGTTGGGGACTCCAGGGCCGTTATATGCAGGGGTGGTACTGCAATTGCTGTTTCTCGAGATCATAAGCCAGACCAAACAGATGAGAGGCAAAGGATTGAAGATGCAGGAGGCTTTGTTATGTGGGCTGGTACTTGGAGAGTTGGAGGTGTTCTTGCTGTTTCTCGTGCATTTGGCGATAGACTTTTGAAGCAGTATGTTGTTGCGGATCCAGAAATCCAGGAAGAAAAAGTTGACAGTTCTCTTGAGTTTCTTATTCTGGCCAGTGATGGGCTATGGGATGTCGTCACAAATGAGGAAGCTGTTGCTATGATTAAACCGATTGGAGACGCAGAGGAGGCAGCAAAAAGACTGATGCAAGAAGCATATCAGAGAGGTAGTGCTGATAATATCACTTGTGTTGTTGTCCGTTTCTTGGTGAACGAAGACACTTCTTCTCAAGTAGCTCCGCGTAACCAAGACACTTCTTCTCAAGTAGCTCCGCGTAATCAAGGCACTTCTTCTCAAGTAACTCCGCATAACCAAGGTACTTCTTCCCAAGTAGCTCCACGTAATCAAAACACTTCTTCTCAAGTAGCTCCGCGTAACCATGGCACTTCTTCTCAAGTTTCTCCGCATAATTAA 1044 0.4349 MGYFNSALSSSSQAKDDAPVSGGGLSHNGKFSYGYASSAGKRSSMEDFYDTRIDGVDGETVGLFGVFDGHGGIRAAEYVKKNLFSNLISHPKFISDTKSAISDAYNHTDNEYLKSENNHHKDAGSTASTAILVGDRLLVANVGDSRAVICRGGTAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKVDSSLEFLILASDGLWDVVTNEEAVAMIKPIGDAEEAAKRLMQEAYQRGSADNITCVVVRFLVNEDTSSQVAPRNQDTSSQVAPRNQGTSSQVTPHNQGTSSQVAPRNQNTSSQVAPRNHGTSSQVSPHN 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00728 347 PANTHER PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE TYPE 2C 3 300 - -
Tsu07g00728 347 SUPERFAMILY PP2C-like 27 278 IPR036457 -
Tsu07g00728 347 MobiDBLite consensus disorder prediction 285 347 - -
Tsu07g00728 347 CDD PP2Cc 31 278 IPR001932 -
Tsu07g00728 347 SMART PP2C_SIG_2 27 278 IPR001932 -
Tsu07g00728 347 Gene3D - 24 285 IPR036457 -
Tsu07g00728 347 ProSiteProfiles PPM-type phosphatase domain profile. 32 278 IPR001932 -
Tsu07g00728 347 ProSitePatterns PPM-type phosphatase domain signature. 63 71 IPR000222 GO:0043169
Tsu07g00728 347 Pfam Protein phosphatase 2C 58 271 IPR001932 -
Tsu07g00728 347 PANTHER ALPHABET, ISOFORM E-RELATED 3 300 - -
Tsu07g00728 347 MobiDBLite consensus disorder prediction 1 22 - -
Tsu07g00728 347 MobiDBLite consensus disorder prediction 1 17 - -
Tsu07g00728 347 SMART PP2C_4 22 276 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00728 Tsu-Chr7 5946700 5950707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00728 1 282 PP2C-type Phosphatase Gene Family AT4G31750 86.926 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00728 K17506 - gmx:100797070 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00728 07 5946700 5950707 Tsu07g00728 07 5946700 5950707 ECH