Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00719 ATGGGAATATATCTGAGCACTCCCAAAACTGATAAGTTTTCTGAGGATGGCGAAAATTATCATCTTAGATATGGTTTATCTTCCATGCAAGGCTGGCGTGCATCAATGGAAGATGCTCATGCTGCATATACTGATCTGGATGGATCTACTTCATTTTTTGGTGTTTATGATGGTCATGGAGGTAAGGTGGTTGCAAAGTTTTGTGCTAAgtttcttcaccatcagatgcTCAAAAGTGAAGCATACTCAGCTGGAGATATAGGAACCTCTCTTCAGCAAACATTCTTAAGAATGGATGAGATGATGCGTGGTCAAAGAGGATGGAGGGAGCTATCAATCTTGGGAGATAAGATGAACAAGTTTAGTGGGATGATAGAAGGGTTGATTTGGTCTCCGCGAAGCAACAATGGTATTAGCCGAACTGATGATTGGGCTTTTGAGGAGGGACCCCATTCTGACTTTGCTGGACCAACTTCAGGAAGCACAGCCTGTGTTGCAGTTATTAGAAACAACCAACTTGTTGTTGCAAATGCTGGTGATTCACGCTGTGTAATATCTCGAAAGGGGCAGGCGTACAATTTGTCTAGAGACCACAAACCTGATCTTGATATTGAAAAGGAAAGAATCTTAAAAGCTGGTGGTTTTATTCATGCAGGCCGAATTAATGGCAGTTTAAACCTTGCAAGAGCTATTgGTGACATGGAATTTAAACAGAATAAATTTCTTCCCGCTGAAAAACAAGTTGTAACTGCCAATCCTGATATAAACACTGTTGAGctttgtgatgaagatgaatttaTGGTGCTAGCTTGTGATGGCATATGGGACTGCTTGTCAAGTCAACAATTGGTAGATTTTGTTCATGAACAACTGCGTTCGGAAACGAGACTTTCTACAGTGTGCGAAAAAGTACTTGACCGGTGTTTGGCACCATCAACTGCTGGTGGCGAAGGATGTGATAACATGACCATGATCTTGGTGCAGTTCAAAAAACTTGCTCAGTCCAGTGCACCAGCAGAAGAGCAATCCTCATCAAATGAAGAAGCTGAAGCACAAGTTGAACCGAAACTGGAAAGAAGTGAAGTTTAG 1089 0.4031 MGIYLSTPKTDKFSEDGENYHLRYGLSSMQGWRASMEDAHAAYTDLDGSTSFFGVYDGHGGKVVAKFCAKFLHHQMLKSEAYSAGDIGTSLQQTFLRMDEMMRGQRGWRELSILGDKMNKFSGMIEGLIWSPRSNNGISRTDDWAFEEGPHSDFAGPTSGSTACVAVIRNNQLVVANAGDSRCVISRKGQAYNLSRDHKPDLDIEKERILKAGGFIHAGRINGSLNLARAIGDMEFKQNKFLPAEKQVVTANPDINTVELCDEDEFMVLACDGIWDCLSSQQLVDFVHEQLRSETRLSTVCEKVLDRCLAPSTAGGEGCDNMTMILVQFKKLAQSSAPAEEQSSSNEEAEAQVEPKLERSEV 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00719 362 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Tsu07g00719 362 SMART PP2C_SIG_2 28 329 IPR001932 -
Tsu07g00719 362 CDD PP2Cc 23 329 IPR001932 -
Tsu07g00719 362 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Tsu07g00719 362 PANTHER PROTEIN PHOSPHATASE 2C 1 341 IPR015655 GO:0004722|GO:0006470
Tsu07g00719 362 MobiDBLite consensus disorder prediction 337 362 - -
Tsu07g00719 362 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 341 - -
Tsu07g00719 362 SUPERFAMILY PP2C-like 3 331 IPR036457 -
Tsu07g00719 362 Gene3D - 1 330 IPR036457 -
Tsu07g00719 362 SMART PP2C_4 12 327 IPR001932 -
Tsu07g00719 362 Pfam Protein phosphatase 2C 140 313 IPR001932 -
Tsu07g00719 362 Pfam Protein phosphatase 2C 23 104 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00719 Tsu-Chr7 5884309 5888971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00719 1 341 PP2C-type Phosphatase Gene Family AT2G25070 76.246 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00719 K17499 - gmx:100787778 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00719 07 5884309 5888971 Tsu07g00719 07 5884309 5888971 ECH
Tsu01g00609 01 5344265 5348860 Tsu07g00719 07 5884309 5888971 PCT