Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00709 ATGGAACCAACATGTGTGGATACTTCTCTCAACCTTAACATTGTCCCTTCTAGAAACGATACAATCGTTGATACTGTGGTTGCTGATCAGGTTTTGGTTGAAGAGTTGGAGCGTCTAAGTAATGAGAATAAGAGATTAAATGAGAAGCTAAACCTCATGTGTGACAATTATGTTGCTTTGCAAAAACATTTGAGTGAATTTAGTCacacaaattttgaaaatgaattggCAATGATGACACAATCGCGGAAGAGAAAGGCCGAAAgcattgaaaaaaattgtatgaatCAGTTTGGCTATGCTATTGCTGAGAGCAGCACAGTTACTACTGATCATGAGGAGACAACTTTCAAACACAACAACATTAACTCGCCAAAAATTTCCAAGGTTCTTGTACCAACAGATGCATCCAATACCAGCTTATATGTGAGAGATGGATATCAATGGAGAAAATATGGCCAGAAAGTTACTAGAGATAACCCCTCTCCTAGGGCTTACTTCAAGTGCTCCTTTGCTCCTGGCTGCCCAGTCAAGAAGAAggTGCAAAGAAGTGTAGAAGACCCTTCCATATTAGTGACAACATACGAAGGAGAACACAACCATCCACATCACCAAGCACAAATACAAATGAGTAGTACTTCAAACCAAAGTGAAACAACTTCAACATATTTGGTTCCTATATCTTCACCCTCTCCTAAGAATCCATCTTCAACTCTTGACTTGGTCACACCAAGAAAATTGATAGCAATTGAAGATGCTCAAAAGTCTTCAATCCAGAAGCTATTAATTCACCAAATGGCTACTTCTTTGACAAGAGATCCTAATTTTGCCACAGCACTTGCCACTGCCATTTCAGgaaaaattatggattttgaaaaacgatGA 885 0.365 MEPTCVDTSLNLNIVPSRNDTIVDTVVADQVLVEELERLSNENKRLNEKLNLMCDNYVALQKHLSEFSHTNFENELAMMTQSRKRKAESIEKNCMNQFGYAIAESSTVTTDHEETTFKHNNINSPKISKVLVPTDASNTSLYVRDGYQWRKYGQKVTRDNPSPRAYFKCSFAPGCPVKKKVQRSVEDPSILVTTYEGEHNHPHHQAQIQMSSTSNQSETTSTYLVPISSPSPKNPSSTLDLVTPRKLIAIEDAQKSSIQKLLIHQMATSLTRDPNFATALATAISGKIMDFEKR 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00709 294 MobiDBLite consensus disorder prediction 204 238 - -
Tsu07g00709 294 Pfam WRKY DNA -binding domain 145 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g00709 294 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 290 - -
Tsu07g00709 294 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 290 IPR044810 GO:0003700
Tsu07g00709 294 ProSiteProfiles WRKY domain profile. 138 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g00709 294 SMART WRKY_cls 143 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g00709 294 MobiDBLite consensus disorder prediction 200 238 - -
Tsu07g00709 294 Coils Coil 29 56 - -
Tsu07g00709 294 SUPERFAMILY WRKY DNA-binding domain 140 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu07g00709 294 Gene3D WRKY domain 128 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00709 Tsu-Chr7 5820499 5822786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00709 6 288 WRKY Transcription Factor Family AT1G80840 46.259 4.74e-74 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu07g00709 WRKY 1.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00709 - - gmx:100127373 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00618 01 5459767 5461495 Tsu07g00709 07 5820499 5822786 PCT