Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00699 ATGGAAACATTGACTCATGAGCTATTGCAGAATCCACAAGAAATTGAAAAACAGAACACATctcaagaacaagaagaaaaagaggCAAAGTTAGACACTTTATTGGATCTGAATATTCCTAGTGAAGATTGCGATATTGGGTGCAATTCAGAGTCCAATTTAGTCACCTATTTGGACACAGGTAATTCTTCTAAAACATCATTAGAAAATCATACTCGTGGCTCTGAATCATCTCCAGAGCCACAGTTTTTCTCTTGCAACTTCTGCAAGAGAAAATTCTATTGTTCACAAGCACTTGGAGGACACCAAAATGCTCACAAAAGAGAAAGGTCAATTGCAAAACGAAGACAAAGGTTTATAGGAACACACAAGATGAAAGGAACAATTTTTGGTATCCCATTTCTTCAAAACCATCATAGTTATGCAAATATGGCATCTCTAATACCAATTCATGGTGTTAATATTAGTAGTAGTACTTCAAGACCACTTGGAATTAAGGCTCACTCCATGATTCATAAACCTGTTCATAATTCTTCATCAAATGGATTTGGAAGCACTTATTATGGACATCATAGTTGGTCAAGACCACTTATGAATCAACAACCTGGAATAGGAAAACTAAGCATGGAAACTTACAAGGAAACCGGATTTTCATCGCGTGGTAGTGTCGGTCGATTCGAAGGAGTTAAAAAAGACAAGCTCAATCCAGGAACTGATCATATGACCTTGAAGAGTAATCAAGAAGATGTGAAGAACCTTGACTTATCCTTAAAGCTATAA 780 0.3538 METLTHELLQNPQEIEKQNTSQEQEEKEAKLDTLLDLNIPSEDCDIGCNSESNLVTYLDTGNSSKTSLENHTRGSESSPEPQFFSCNFCKRKFYCSQALGGHQNAHKRERSIAKRRQRFIGTHKMKGTIFGIPFLQNHHSYANMASLIPIHGVNISSSTSRPLGIKAHSMIHKPVHNSSSNGFGSTYYGHHSWSRPLMNQQPGIGKLSMETYKETGFSSRGSVGRFEGVKKDKLNPGTDHMTLKSNQEDVKNLDLSLKL 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00699 259 ProSiteProfiles Zinc finger C2H2 type domain profile. 84 111 IPR013087 -
Tsu07g00699 259 Coils Coil 17 37 - -
Tsu07g00699 259 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 9 259 IPR044246 GO:0009788
Tsu07g00699 259 SUPERFAMILY beta-beta-alpha zinc fingers 82 111 IPR036236 -
Tsu07g00699 259 Gene3D Classic Zinc Finger 60 130 - -
Tsu07g00699 259 ProSitePatterns Zinc finger C2H2 type domain signature. 86 106 IPR013087 -
Tsu07g00699 259 MobiDBLite consensus disorder prediction 1 18 - -
Tsu07g00699 259 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 9 259 - -
Tsu07g00699 259 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00699 Tsu-Chr7 5663425 5664325 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00699 35 259 C2H2 Transcription Factor Family AT5G25160 38.367 1.17e-31 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00699 - - mtr:MTR_3g106230 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00657 01 5799735 5800730 Tsu07g00699 07 5663425 5664325 PCT