Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00696 ATGGGTAAGTCGGCTGTGGATTTAATGGGATCTTCTTCCGAAGTTCATTTTTCTGGATTTCACATGGATGGTTTTGAGAAAAGAGAGGCTAACACAGAACAACCAACAACATCGGCAACTGATATGTACAACCAACCTTTCATCATAGGTGTTGCTGGGGGTGCAGCATCCGGCAAAAAAACAGTTTGTGATATGATTGTTCAACAGCTTCATGACCAACGAGTTGTGCTTGTTAATCAGGATTCTTTTTACAATAACTTGACTGAGGAAGAACGAGCACGAGTACAAGATTACAACTTTGACCATCCTGATGCTTTTGATACCGAGGAATTGCTTCGTGTTATGGACAAGTTGAAGCATGGTGAAGCTGTAGACCTTCCAAAGTATGATTTTAAGAGTTACAAAAGTGATGCGTTACGAAGGGTGAACCCTTCAGATGTTATAATTTTAGAAGGCATCCTTGTTTTCCACGATCCACGTGTTCGGGAGTTGATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGTTTGGCAAGAAGGATTAGACGTGATACCAGCGAGAAGGATCGGGATATTGGAGCAATTCTCGATCAGTATTCAAAATTTGTGAAGCCAGCTTTTGATGACTTTATTCTTCCAACAAAAAAGTATGCCGATATAATCATACCTCGTGGAGGAGATAATCATGTAGCTGTTGATTTGATTGTTCAGCATATCCGCACAAAGCTTGGTCAGCATGACCTGTGTAAAATATATCCGAATTTATACGTCATTCAGTCAACTTTTCAGATACGGGGCATGCATACCCTTATACGTGATGCTCAAATAACGAAGcatgattttgtattttatgcTGACCGTTTGATTCGTTTGGTTGTAGAACATGGTTTGGGACATCTTCCATTTACAGAAAAGCAAGTAGTCACTCCCACCGGTTCTGTATACACTGGTGTGGATTTTTGCAAGAGGTTGTGTGGTGTCTCTGTCATCAGAAGTGGGGAGAGTATGGAAAATGCCTTAAGAGCATGCTGTAAAGGTATTAAGATTGGGAAAATTCTGATCCACAGAGAAGGTGACAATGGTCAACAGCTAATATATGAAAAGTTGCCGAATGATATCTCAGAAAGGCATGTGTTACTGTTGGACCCTATCCTCGGCACAGgTAATTCGGCTGTTCAAGCGATTTCTTTACTTATACAGAAGGGTGTACCAGAATCCaacattatatttcttaatcTCATATCTGCTCCTAAAGGTGTTCATGTGGTCTGCAAAAGTTTCCCAAGAATTAAAATAGTGACATCTGAGATAGAGATTGGTTTGAACGAAGATTTCCGTGTCATACCAGGCATGGGCGAGTTTGGAGATCGGTACTTCGGAACCGATGACGATGAACAAGTGACGGTTATTTCACAGTAA 1425 0.3993 MGKSAVDLMGSSSEVHFSGFHMDGFEKREANTEQPTTSATDMYNQPFIIGVAGGAASGKKTVCDMIVQQLHDQRVVLVNQDSFYNNLTEEERARVQDYNFDHPDAFDTEELLRVMDKLKHGEAVDLPKYDFKSYKSDALRRVNPSDVIILEGILVFHDPRVRELMNMKIFVDTDADVRLARRIRRDTSEKDRDIGAILDQYSKFVKPAFDDFILPTKKYADIIIPRGGDNHVAVDLIVQHIRTKLGQHDLCKIYPNLYVIQSTFQIRGMHTLIRDAQITKHDFVFYADRLIRLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKRLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISERHVLLLDPILGTGNSAVQAISLLIQKGVPESNIIFLNLISAPKGVHVVCKSFPRIKIVTSEIEIGLNEDFRVIPGMGEFGDRYFGTDDDEQVTVISQ 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00696 474 CDD UMPK 48 244 IPR000764 -
Tsu07g00696 474 TIGRFAM udk: uridine kinase 45 244 IPR000764 -
Tsu07g00696 474 Gene3D - 43 247 IPR027417 -
Tsu07g00696 474 PRINTS Uridine kinase signature 46 63 - -
Tsu07g00696 474 PRINTS Uridine kinase signature 76 87 - -
Tsu07g00696 474 PRINTS Uridine kinase signature 121 136 - -
Tsu07g00696 474 PRINTS Uridine kinase signature 176 186 - -
Tsu07g00696 474 PRINTS Uridine kinase signature 190 201 - -
Tsu07g00696 474 PRINTS Uridine kinase signature 212 225 - -
Tsu07g00696 474 Pfam Phosphoribulokinase / Uridine kinase family 48 232 IPR006083 GO:0005524|GO:0016301
Tsu07g00696 474 PANTHER URIDINE KINASE 14 465 - -
Tsu07g00696 474 SUPERFAMILY PRTase-like 247 464 IPR029057 -
Tsu07g00696 474 Gene3D - 248 463 IPR029057 -
Tsu07g00696 474 PANTHER URIDINE KINASE 14 465 - -
Tsu07g00696 474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 237 IPR027417 -
Tsu07g00696 474 CDD PRTases_typeI 321 436 IPR000836 -
Tsu07g00696 474 Pfam Uracil phosphoribosyltransferase 262 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00696 Tsu-Chr7 5614545 5622657 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00696 3 466 PRT Gene Family AT4G26510 83.262 0.0 808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00696 K00876 - gmx:100527893 882.863