Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00694 ATggtgcttcttcttcttcttatattgAGTTTCATATGTATATGGATTTACCACAAAAATTATTCATCtaaatccaaaagaaaaaatgttcaaaacatagATGCAGAGAAAGGGAACACACCAACACAAATTTTGAGTAAATTCAGTTCCATTGAGTTGGTTGGTATGAAGAAAGGAATTGTTCCAATAATTGATtataaacaaatagaaaaaacgACCAATAATTTTGAGGAAAATAATATCTTGGGTGTTGGAGGTTTTGGTTGTGTTTACAAGGCACAATTTGATGAAAATTTGGATGTTGCTGTCAAGAAACTACATTGTCAAACTCAAAATGCTGAGACAGAATTTGAGAATGAGATGGAATTGTTAAGTAAAATTCAACATCCAAATATAATTACTTTATTGGGATGTAGCATTAATGGAGACATGAGATTTATTGTGTATGAGTTAATGCAAAATGGATCCTTAGAAGCTCAATTACATGGACCATCTCAAGGCTCAAGATTGACTTGGTTTATGAGAATGAAGATTGCTCTTGACACAGCAAGAGGATTAGAGTATCTACATGAGCATTGTTACCCTCCGGTGATTCATAGAGATATGAAATCTTCTAACATTCTTTTAGATGCAAACTTCAATGCTaagCTCTCTGATTTTGGTCTAGCTATAATTAATGGGTCCCAAAAGAAGAACATCAAGCTTTCAGGAACATTGGGGTACGTAGCCCCAGAATATCTTTTAGATGGGAAATTGACTGATAAAAGTGATGTGTATGCTTATGGGGTTGTACTCCTAGAGCTCCTGTTAGGGAGGAAGCCTGTGGAAAAACTGGCACAAGCTCGGTGCCAATCCCTTGTCACATGGGCCATGCCTCAGCTCACAGACAGATCTAAACTTCCAAACATTATAGATCCAGTGATAAAGGACACAATGGATCTCAAGCACTTATACCAGGTTGCTGCAGTAGCTGTGCTGTGTGTGCAACCAGAGCCAAGTTACAGGCCATTAATCACAGATGTTCTTCACTCACTTATCCCTCTTGTTCCTGTTGAGCTCGGAGGAACACTCAGAGTGTCACAATTTATTCCTCAAGACACTCCACCTGTGAGTTCAAGGCTGCAAGGcagtgataaacttgtaacacAATAA 1152 0.3524 MVLLLLLILSFICIWIYHKNYSSKSKRKNVQNIDAEKGNTPTQILSKFSSIELVGMKKGIVPIIDYKQIEKTTNNFEENNILGVGGFGCVYKAQFDENLDVAVKKLHCQTQNAETEFENEMELLSKIQHPNIITLLGCSINGDMRFIVYELMQNGSLEAQLHGPSQGSRLTWFMRMKIALDTARGLEYLHEHCYPPVIHRDMKSSNILLDANFNAKLSDFGLAIINGSQKKNIKLSGTLGYVAPEYLLDGKLTDKSDVYAYGVVLLELLLGRKPVEKLAQARCQSLVTWAMPQLTDRSKLPNIIDPVIKDTMDLKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVPVELGGTLRVSQFIPQDTPPVSSRLQGSDKLVTQ 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00694 383 SMART serkin_6 76 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00694 383 PANTHER OS01G0750732 PROTEIN 2 367 - -
Tsu07g00694 383 Pfam Protein kinase domain 76 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00694 383 ProSitePatterns Protein kinases ATP-binding region signature. 82 105 IPR017441 GO:0005524
Tsu07g00694 383 SUPERFAMILY Protein kinase-like (PK-like) 56 345 IPR011009 -
Tsu07g00694 383 ProSiteProfiles Protein kinase domain profile. 76 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00694 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Tsu07g00694 383 PANTHER BNAA04G14780D PROTEIN 2 367 - -
Tsu07g00694 383 Gene3D Phosphorylase Kinase; domain 1 38 151 - -
Tsu07g00694 383 CDD STKc_IRAK 82 348 - -
Tsu07g00694 383 Gene3D Transferase(Phosphotransferase) domain 1 152 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00694 Tsu-Chr7 5560365 5563459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00694 5 349 Receptor kinase-like Gene Family AT3G58690 45.326 1.81e-97 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Tsu07g00694 Pkinase 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00694 - - gmx:100784795 588.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu01g00662 01 5838160 5842159 Tsu07g00694 07 5560365 5563459 PCT