Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00662 ATGATCATGGCTTCTTCAAAACCCATAATCAGAGTCCCAACAAATTCCCTTCCATCTACTCCAAAACTTCCCCAACTTCAAATTTCACTCCCAACCATCACCCCCAAACTCAAACTCCAGCTCTCAAAACTCAAATCCCTAACCCTAGCCACAACTTCACTCTCCTTAGCCTTCGCACCACCTTCCTTCGCAATCGAAAAAGCCGCACTCTTCGATTTCAATCTCACTCTCCCAATCATAGTCGTCGAGTTTCTTTTCCTCATGGTTGCTCTCGACAAACTTTACTTCACACCTCTCGGAAATTTCATGGACGAAAGGGACGCTAACATCAGAGGAAAATTGAACAGCGTGAAGGACACTTCGGAGGAGGTGAAGCAATTGGAGGAACAAGCCAATGCGGTTTTGAGAGCTGCGCGTGCGGAAATAGCAGTGGCTTTGAATCAGATGAAGAAGGAAACTCAAGCTGAAGTTGAAGCAAAGATTGCTGAAGGGAGGCAAAAAGTGGATGCTGAATTGCAAGAAGCTCTTGCGAATTTGGAAAAGCAAAAGGAAGAAACTGTTAAAGCTCTTGATTCTCAGATTGCTGCTCTTAGCCAGGATATTGTTAATAAGCTAACAATTGCTAATGAAGTCACTCAAAATTTAGAGGACTCAACTCCTAAGAGCAAGAAACACCCGCAACCAACATGGAACACTGAACAAAATTTGGTGTTATTTAGTGGGTGGATTAAATTTTCAACTAGCAGTGTTGTTGGAAGAAACCAAAAACGTGAAATGTATTGGTGTAATATTGCTGAGTATCGTAATGAGCATTGCAAATTCGATCCTCCGCGTGATGATGTTGCATGCCAAAACCGCTTTAATTATATGAACAAATTACTGGGTAAATGGATTGTCGCTTATGATGGCGCTAAGCGTTTGCAAGGAAGCAGTTGGTCAGAGAATGACATTTTGGCAAAAGCACAGGAAATATACGCATGTGGGAAGAATGCTAAATTCACTTTAATGGAAGAATGGAACGCTGTCCATGATCAACCGCATTTTAGAAGTTTAGTTGGAGGAGATATTAACTCAGGAAGTAGTTGA 1086 0.419 MIMASSKPIIRVPTNSLPSTPKLPQLQISLPTITPKLKLQLSKLKSLTLATTSLSLAFAPPSFAIEKAALFDFNLTLPIIVVEFLFLMVALDKLYFTPLGNFMDERDANIRGKLNSVKDTSEEVKQLEEQANAVLRAARAEIAVALNQMKKETQAEVEAKIAEGRQKVDAELQEALANLEKQKEETVKALDSQIAALSQDIVNKLTIANEVTQNLEDSTPKSKKHPQPTWNTEQNLVLFSGWIKFSTSSVVGRNQKREMYWCNIAEYRNEHCKFDPPRDDVACQNRFNYMNKLLGKWIVAYDGAKRLQGSSWSENDILAKAQEIYACGKNAKFTLMEEWNAVHDQPHFRSLVGGDINSGSS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00662 361 PANTHER - 198 361 - -
Tsu07g00662 361 Coils Coil 110 155 - -
Tsu07g00662 361 PANTHER PUTATIVE-RELATED 198 361 - -
Tsu07g00662 361 Coils Coil 165 200 - -
Tsu07g00662 361 Hamap ATP synthase subunit b [atpF]. 71 208 IPR002146 GO:0015078|GO:0015986|GO:0045263
Tsu07g00662 361 Pfam ATP synthase B/B' CF(0) 77 205 IPR002146 GO:0015078|GO:0015986|GO:0045263
Tsu07g00662 361 Hamap ATP synthase subunit b' [atpF2]. 70 207 IPR034679 GO:0015078|GO:0015986|GO:0045263
Tsu07g00662 361 CDD ATP-synt_Fo_b 76 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00662 Tsu-Chr7 5259933 5263288 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00662 215 339 Glutathione S-transferase Gene Family AT5G41240 24.031 8.61e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00662 K02109 - tcc:108663492 258.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00662 07 5259933 5263288 Tsu07g00662 07 5259933 5263288 ECH
Tsu01g00688 01 6047510 6056593 Tsu07g00662 07 5259933 5263288 PCT