Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00661 ATGAGTGAGATGATTGTATCTAACGAGAGTCCTCGACGATCTCTGAGCATTCAACTTTCTTCGCTGATGATCGTGGATGCCGGATTATCATCCTACGATAAACTTCCTTCTCAAACTCTCACACTCTCAATCCTCAAATTGGATTCATCTTCCTTCCAAGTTGAAGTTGCAAAAACAGCAACTGTTGCTGTGCTTAAGAAAGCGGTGGAAGCAGCTTTTAGTCACATACCTCTCGACGGACCGGAGAAAATATCATGGCCACTTGTTTGGGGGCAATTTTGTTTATGCTATGGAGAACAAAAGTTAGTTACAGAAACGGATTATCTTAGAGATTATGGTGTCAAGGATGGTGATCAGCTTCATTTCGTTCACCATGTCTCTAACATCTgtaattttcaaagaaaaccATCGAAGAAAAGGATTGCCAATTTGAAACATGGGAGGTCATCGTCACAAGTGAATAATAGGTGCCAACAGAAAGAACATAGTGATGAAGACAACATTGGTTTAGAGAATATAGTCATAGAGAATGGGAAGGTCCAGAATTGCAATGCAGAAGAAAATCGCCTTGGAGTAAGCGGCAGGTTAACTGGATATTTGGGAGGGATGTTCTCAGAGGCCCGAATGGCAGTTGTGAGAAGAGCTAGAATGGAAGGCGGAATTTCCAGAGGTATAGCAAGCAGTTTTAAGAAGGTTAAAGGGATGGTAGGAAATTGCAGAAAGCCGCATCGAAGACATGCATGGAAAGAAGAGTTTTCGTCGTGA 765 0.4131 MSEMIVSNESPRRSLSIQLSSLMIVDAGLSSYDKLPSQTLTLSILKLDSSSFQVEVAKTATVAVLKKAVEAAFSHIPLDGPEKISWPLVWGQFCLCYGEQKLVTETDYLRDYGVKDGDQLHFVHHVSNICNFQRKPSKKRIANLKHGRSSSQVNNRCQQKEHSDEDNIGLENIVIENGKVQNCNAEENRLGVSGRLTGYLGGMFSEARMAVVRRARMEGGISRGIASSFKKVKGMVGNCRKPHRRHAWKEEFSS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00661 254 MobiDBLite consensus disorder prediction 143 162 - -
Tsu07g00661 254 PANTHER UBIQUITIN-LIKE SUPERFAMILY PROTEIN 6 245 - -
Tsu07g00661 254 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 6 245 IPR039690 GO:0000398|GO:0005689
Tsu07g00661 254 CDD Ubl_SNRNP25 40 125 IPR040610 -
Tsu07g00661 254 Pfam Ubiquitin-like domain 40 126 IPR040610 -
Tsu07g00661 254 SUPERFAMILY Ubiquitin-like 35 127 IPR029071 -
Tsu07g00661 254 Gene3D - 35 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00661 Tsu-Chr7 5256614 5259039 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00661 - - mtr:MTR_3g106830 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00661 07 5256614 5259039 Tsu07g00661 07 5256614 5259039 ECH
Tsu07g00661 07 5256614 5259039 Tsu01g00688 01 6047510 6056593 ECH