Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00659 ATGGAGCTTCAATTAGGCCTAGCTCTACCAATTCATAGTTCTATTGATGGATTTAATCTTAGTGGGAGTGGATGTTCTGAAAAACAAAAGTATTGCAAAAACAAGCGTAGCTATGAAGAGTCTTTTGGACATTTTTTGAAACCTTTGCCTTTATTAGTATGGAGTGGACAAccaaatgaagaagatgatcgCAATAAAAAGATGAACACAAACATTCACACATCAAATAATGAAGAAGAAAATCATTTGGTGGGGTGGCCACCGATTAAATCGTGGAGGAAGAAAGAGCTTCATGATCAGCAGCATCATGGCCATATAAGGATTGATCATAGGATTCAAAGTAATGAAAGTCAAGGTAGACGATCAAAACCTTTATATGTTAAGGTTAACATGGAAGGGGTTGCCATAGGTAGACAAATCAATTTGAGGCTTTACAACTCTTATCACACTCTCAAAGACTCATTGATTAACATGTTTGGTAAATcagatcaaaatTTCGAGCAAGATGGAGCAAACTATACACTAGCATTTCAGAATATACAAGGGAATTGGCTACTTACTGGAGACATACCATGGCAATCCTTTATTGGTAAGGTGCGGCGTTTGGCTATATTGAGGaatggaaaatga 630 0.3476 MELQLGLALPIHSSIDGFNLSGSGCSEKQKYCKNKRSYEESFGHFLKPLPLLVWSGQPNEEDDRNKKMNTNIHTSNNEEENHLVGWPPIKSWRKKELHDQQHHGHIRIDHRIQSNESQGRRSKPLYVKVNMEGVAIGRQINLRLYNSYHTLKDSLINMFGKSDQNFEQDGANYTLAFQNIQGNWLLTGDIPWQSFIGKVRRLAILRNGK 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00659 209 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 1 208 IPR003311 GO:0005634|GO:0006355
Tsu07g00659 209 ProSiteProfiles PB1 domain profile. 124 209 IPR000270 GO:0005515
Tsu07g00659 209 PANTHER AUXIN-RESPONSIVE PROTEIN IAA29 1 208 - -
Tsu07g00659 209 SUPERFAMILY CAD & PB1 domains 115 202 - -
Tsu07g00659 209 Pfam AUX/IAA family 169 207 IPR033389 -
Tsu07g00659 209 Pfam AUX/IAA family 32 161 IPR033389 -
Tsu07g00659 209 Gene3D - 125 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00659 Tsu-Chr7 5243917 5246252 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00659 118 204 B3 DNA Binding Superfamily AT3G61830 34.483 3.20e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Tsu07g00659 AUX_IAA 9.6e-33 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00659 K14484 - gmx:100783359 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00659 07 5243917 5246252 Tsu07g00659 07 5243917 5246252 ECH