Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00655 atGGTAGTAGCAGtaaaaaaacattgtttttcATCATCCcatgtttttcttcttgttcttttcATTTCCATCTTCTTCATGTCAAAACCATGTTTCTGTGGTATTCAATATATAGGCAAAATCTTACCTGGTACTCAAGGTTCACAAATGGATTGGATTGACAAAGAAGGAAAATTTCTCCTTTCACAAAGCCAAAATTTTGCTTTTGGTTTTGTCACCACTACCAACGACACCACCAAGTTTCTATTAGTAATTGTCCATGTATCAAGCACCGCTGTGATTTGGACTGCTAATAGAGCAAAACCTGTTTCTAATTCTGATGATTTTGTCTTTGATAAAAAGGGTAATGCTTTTTTACAAAAAGATGGAATTTTGATCTGGTCTACAAACACAATTAACAAAGGGGTTTCTTCAATGGTGTTGCAGGATAATGGAAATTTGGTTTTGCTTGGGAAGGATAACAGTACGGTAATTTGGcaaagttttgattttcctACTGATACTTTGTTGCCTGAACAGGTTTTCAAAGAAGGAATGAAACTTACTAGTGAACCTAGTTTGAATAATTTGACCTATGTTCTTGAGATTAAATCTGGTAATGTTGTTCTTTCAGCTGGTTTCAAAATTCCACAGGTTTATTGGTCTATGCAGAATGATAACCGTAAAATCATTGATAAGGAGGGTGATGTTGTGGTTACGGCGAATATAAGTGATAATTCTTGGAgattttatgatgagaaaaagTCTTTGTTGTGGCAATTCATTTTCTCTGATATTTCAGGTGGGAAAAATGCAACTTGGATTGCTGTTCTGGGAAGcaatggtgttattactttctcTAGTCTTAACAGTGGTGGATCGACCGGTAGTTCTTCGACAAGGATACCGCAAGATCCTTGTGGTACACCGGAGCCATGTGATCCTTACAATATATGCACGGACGACCGTGTGTGTAGTTGTCCTTCTGTTGTTCCTAGTTGTAAACCTGGTTTTGTTTCTGCTTGTAATGAAAAATCAGAAAAGTCTATTGAATTTCTGAAAGGTGATGATGGGCTTGATTACTTTGCACTTGATTTTCTTAAGCCCTTTTCAAAAACCGATTTGGTAGGTTGTCAAACGGCTTGCCGTGGAAATTGCTCTTGTCTTGCAATGTTCTTTAATAAAAGTTCTGGAAACTGTTTCCTGTTGGAAAGTGTAGGAAGTTTTCAGAAATCTGATGATTCTGATTATGTTTCTTACATTAAGGTCTCAAGCGATGGAAACACAAAAGGAAGTGGAAGCAGCAATAAACAcatcattgttgttgttgttgtaattGTCATATTAACTTTGTTTGTAATTTCTCTTCTGCTGTTTGTTGGGGTTAGATACTACAGGAAAAAGAAAAGGTTACCGGAGTCTCCTAGAGATAATTCAGAAGAGGACAATTTCTTGGAGAATTTAGCCGGTATGCCAATCCGTTACCGCTACAAAGATCTCGAAGTTGCAACGAATAACTTCTCAGAGAAGCTTGGCTCAGGAGGTTTTGGTTCAGTTTACAAAGGAGCTCTACCTGATGGAACTCTATTAGCTGTGAAGCAACTAGAAGGTATTGGTCAAGGGAAGAAAGAGTTCAGAGCTGAAGTTAGCATCATTGGAAGCATTCATCACCTTAATTTGGTAAGGCTCAAAGGTTTTTGTGCTGATGGAACACATAGGCTTCTAGTTTATGAGTTTATGGCTAATAACTCATTGGATAAATGGATattcaagaagaaaaaaggCGAATTTCTTTTGGATTGGGATACAAGGTTTAACATAGCAGTAGGAACAGCAAAAGGGCTAGCTTATTTACACGAAGATTGCGACTCAAAGATTGTTCATTGTGACATCAAGCCTGAAAATGTACTCCTCGACGATCACTTCACGGCTAAAGTTTCAGATTTTGGTTTAGCCAagctcatgaatagagaacaaAGTCACGTTTTTACAACAATGAGAGGAACGCGCGGCTACCTTGCACCTGAATGGATAACAAACTACGCTATATCAGAGAAAAGTGATGTATACAGCTACGGAATGGTGTTGCTAGAGATTCTCGGAGGAAGGAAGAATTATGATACTAATGAGGGTTCAGAGAAAAGCTATTTTCCTAGTTTTGCTTTTAAGATGATGGAAGAAGGGAAAATGAGAGATATACTTGATTCCGAGCTGAAAATCGATGAGCATGATGATAGAGCTCAATGTGCTATAAGGGTAGCATTGTGGTGCATACAAGAAGACATGTCTATGAGACCTTCAATGACTAAAGTTGTTCAAATGTTGGAAGGTCTTTGTAATGTTCCTATACCACCAACAAGTTCATATTTGGGTTCTCGGCTTTATGCTACCGCGTTCAAATCATCTAGCGAAGGCGGTAACTCATCTGGTCCATCAGATTGTAATAGTAATAGTGATGCTTATCTATCAGCAGTTCGTCTTTCTGGCCCAAGATAA 2475 0.36 MVVAVKKHCFSSSHVFLLVLFISIFFMSKPCFCGIQYIGKILPGTQGSQMDWIDKEGKFLLSQSQNFAFGFVTTTNDTTKFLLVIVHVSSTAVIWTANRAKPVSNSDDFVFDKKGNAFLQKDGILIWSTNTINKGVSSMVLQDNGNLVLLGKDNSTVIWQSFDFPTDTLLPEQVFKEGMKLTSEPSLNNLTYVLEIKSGNVVLSAGFKIPQVYWSMQNDNRKIIDKEGDVVVTANISDNSWRFYDEKKSLLWQFIFSDISGGKNATWIAVLGSNGVITFSSLNSGGSTGSSSTRIPQDPCGTPEPCDPYNICTDDRVCSCPSVVPSCKPGFVSACNEKSEKSIEFLKGDDGLDYFALDFLKPFSKTDLVGCQTACRGNCSCLAMFFNKSSGNCFLLESVGSFQKSDDSDYVSYIKVSSDGNTKGSGSSNKHIIVVVVVIVILTLFVISLLLFVGVRYYRKKKRLPESPRDNSEEDNFLENLAGMPIRYRYKDLEVATNNFSEKLGSGGFGSVYKGALPDGTLLAVKQLEGIGQGKKEFRAEVSIIGSIHHLNLVRLKGFCADGTHRLLVYEFMANNSLDKWIFKKKKGEFLLDWDTRFNIAVGTAKGLAYLHEDCDSKIVHCDIKPENVLLDDHFTAKVSDFGLAKLMNREQSHVFTTMRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEILGGRKNYDTNEGSEKSYFPSFAFKMMEEGKMRDILDSELKIDEHDDRAQCAIRVALWCIQEDMSMRPSMTKVVQMLEGLCNVPIPPTSSYLGSRLYATAFKSSSEGGNSSGPSDCNSNSDAYLSAVRLSGPR 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00655 824 Pfam D-mannose binding lectin 93 175 IPR001480 -
Tsu07g00655 824 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 218 IPR036426 -
Tsu07g00655 824 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524
Tsu07g00655 824 Pfam Protein kinase domain 501 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00655 824 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 15 824 - -
Tsu07g00655 824 CDD STKc_IRAK 504 771 - -
Tsu07g00655 824 CDD B_lectin 53 165 IPR001480 -
Tsu07g00655 824 ProSiteProfiles Protein kinase domain profile. 498 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00655 824 Gene3D - 52 164 IPR036426 -
Tsu07g00655 824 SUPERFAMILY Protein kinase-like (PK-like) 480 769 IPR011009 -
Tsu07g00655 824 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Tsu07g00655 824 ProSiteProfiles Bulb-type lectin domain profile. 45 162 IPR001480 -
Tsu07g00655 824 Gene3D Transferase(Phosphotransferase) domain 1 573 775 - -
Tsu07g00655 824 SMART serkin_6 498 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00655 824 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 15 824 - -
Tsu07g00655 824 Gene3D Phosphorylase Kinase; domain 1 465 572 - -
Tsu07g00655 824 SMART blect_4 51 165 IPR001480 -
Tsu07g00655 824 PIRSF SRK 10 820 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00655 Tsu-Chr7 5195822 5198754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00655 442 780 Receptor kinase-like Gene Family AT5G20050 45.961 1.62e-95 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tsu07g00655 Pkinase 2.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00655 - - gmx:100791158 1251.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00655 07 5195822 5198754 Tsu07g00655 07 5195822 5198754 ECH
Tsu07g00655 07 5195822 5198754 Tsu01g00690 01 6065937 6069528 ECH
Tsu01g00690 01 6065937 6069528 Tsu07g00655 07 5195822 5198754 PCT