Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00654 ATGAATGTTTGGCAGGCGTTTCTCACTCCAATTGCAACCACACCTACAACAACGATCACTCCAAGCGCTATCCCTTCTTGTTTTCGGTTTCCTATTGTCCAGTGCTCAATCGTATCAGGCGGTGAAATCAATTATCCCGCCAAATTACAACCGTCATCTTTCTCAACAGTTAAGTTTCGCTCCGACCATGCTTCTTCAGAGGTTTCAAGTAGCAGTAGGAGAGGGTTAATATTCAGCATAGCCACGTTGCCATGTCTTCTTCCTCTCACTCACATCTTTGCTTCTCTCCCAGCCAACGCCATGCAACCAGATACAAAAGAATATCTTCTAATTAAAGAAGAATTGAGGAAGGTGTTGTCAAAGAGAAAGGCCGCGGGTGTGCTTCGTTTGGTTTTCCATGATGCTGGAACTTTTGAAATTGATGACAATACAGGTGGCATGAATGGTTCTATAGTCTATGAACTTGACAGACCTGAAAATGCTGGTCTGGAAAAATCAGTAAAGgttctgcagaaagcaaaaaCTCAGATAGATGCTATCCGTCCAGTATCCTGGGCGGATCTTATTTCTGTGGCTGGAGCTGAAGCAGTTGAATTATGTGAAGGTCCTCCCATCCAAGTTTTGCTCGGCAGACAAGATTCGCTGGGGCCTGATCCTGAAGGAAGACTTCCTTTGGAAACTCTTGATGCTTCTGGTTTGAAGAGAAACTTCCAGAAAAAAGGTTTTTCAACACAAGAACTGGTAGCTTTGTCTGGAGCCCACACTCTTGGAAGTAAAGGTTTTGGAAGCCCTACTACTTTTGACAATTCATATTATAAGGTTCTTTTGGAGGAGCCGCGGACACCTTCCGGTGGTATGTCGACTATGGTTGGTCTTCCTTCAGATCACGCACTTGTTGAGGATGATGAATGCTTAAGATGGATTAAACAATACGCAGACAATGAGAGTATGTTCTTTGAAGATTTCAAAAAGGCGTATGTCAAGCTGGTGAATTCTGGTGTGAGGTGGAATAGCTTATAA 1020 0.4275 MNVWQAFLTPIATTPTTTITPSAIPSCFRFPIVQCSIVSGGEINYPAKLQPSSFSTVKFRSDHASSEVSSSSRRGLIFSIATLPCLLPLTHIFASLPANAMQPDTKEYLLIKEELRKVLSKRKAAGVLRLVFHDAGTFEIDDNTGGMNGSIVYELDRPENAGLEKSVKVLQKAKTQIDAIRPVSWADLISVAGAEAVELCEGPPIQVLLGRQDSLGPDPEGRLPLETLDASGLKRNFQKKGFSTQELVALSGAHTLGSKGFGSPTTFDNSYYKVLLEEPRTPSGGMSTMVGLPSDHALVEDDECLRWIKQYADNESMFFEDFKKAYVKLVNSGVRWNSL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00654 339 Gene3D - 112 333 - -
Tsu07g00654 339 PRINTS Plant ascorbate peroxidase signature 222 239 IPR002207 GO:0004601|GO:0006979|GO:0020037
Tsu07g00654 339 PRINTS Plant ascorbate peroxidase signature 124 139 IPR002207 GO:0004601|GO:0006979|GO:0020037
Tsu07g00654 339 PRINTS Plant ascorbate peroxidase signature 310 334 IPR002207 GO:0004601|GO:0006979|GO:0020037
Tsu07g00654 339 PRINTS Plant ascorbate peroxidase signature 201 213 IPR002207 GO:0004601|GO:0006979|GO:0020037
Tsu07g00654 339 PRINTS Plant ascorbate peroxidase signature 142 152 IPR002207 GO:0004601|GO:0006979|GO:0020037
Tsu07g00654 339 PRINTS Plant ascorbate peroxidase signature 240 261 IPR002207 GO:0004601|GO:0006979|GO:0020037
Tsu07g00654 339 PRINTS Plant ascorbate peroxidase signature 182 200 IPR002207 GO:0004601|GO:0006979|GO:0020037
Tsu07g00654 339 Pfam Peroxidase 113 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g00654 339 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g00654 339 PRINTS Haem peroxidase superfamily signature 201 213 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g00654 339 PRINTS Haem peroxidase superfamily signature 183 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g00654 339 PRINTS Haem peroxidase superfamily signature 124 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g00654 339 SUPERFAMILY Heme-dependent peroxidases 121 338 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tsu07g00654 339 ProSitePatterns Peroxidases active site signature. 124 135 IPR019794 GO:0004601
Tsu07g00654 339 PANTHER L-ASCORBATE PEROXIDASE 6-RELATED 58 336 - -
Tsu07g00654 339 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 58 336 IPR044831 GO:0004601|GO:0034599
Tsu07g00654 339 ProSitePatterns Peroxidases proximal heme-ligand signature. 246 256 IPR019793 -
Tsu07g00654 339 ProSiteProfiles Plant heme peroxidase family profile. 124 339 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tsu07g00654 339 Gene3D Peroxidase, domain 2 224 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00654 Tsu-Chr7 5190410 5195077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00654 122 337 Peroxidase AT4G16270 31.317 6.76e-21 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00654 K00434 - gmx:100792735 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00654 07 5190410 5195077 Tsu07g00654 07 5190410 5195077 ECH