Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00650 ATGCCTCAGCTGCTACATGGGACACTTAAGGTAACCATAAGTGAAGTTGATAGGTTGCAAGCTGGATGTAATTTGGATTTCTGTCGAAAGGGCACAACAAACAAGGGGAAGAGATTTCTAGCCCAAGTCAAAGGTTGTCTGTTGTGCAGGCCTGAGATTGTCGGGACAAGACTCTATGCAACAGTTGATTTAGATAAAGCAAGAGTTGGACGAACCAGAATGATCGGGAACCAACCCTCAAACCCGAAATGGAATGAGACATTTGAAATTTATTGCGCTCATTACATATCGCACATTGTATTCACTGTCAAAGATGATAATCCAATTGGAGCAACTCTAATCGGAAGAGCTTATATCCCTGCCGAGAAAGTTCTCAAGGGACCTATAATTAACAGATGGGTTGAGATATTGGACGAAGAAGATCATCGTCCTGTATCAGGTGGTTCTAAAATTCGTGTTAGCATACAATTTTCTAGTGTCACTGAGgacagaaactgtttatggtcTCAGGGAATACATATGCCATATTTAGGAGTTTCGCGTACATTTTTTGACCAGAGACAAGGTTGTAGTGTTACTTTATACCAAGATGCTCATGTTCCTGATAGTGTTCATCCATGGATTCCAATCTCTGGAACAAAATATTATGTTCCTGGACGATGTTGGGAAGATATTTACAATGCAATTATGGATGCTAAACTCTTTATTTACATAACTGGTTGGTCTGTTCATACTGAAATAACCTTGATTAGGGACCCAAACAAGCCAACAGAAACTAGCATCACGCTTGGAGAAATGCTCAAGAGAAAAGCCAATGAAGGTGTTAATGTTCTTATGCTTGTTTGGGATGACAGAACTTCTGTTCCGGGTTTTAAGAAAGATGGTTTGATGGGAACACATGATCAAGAAACTGCCGAgtattttaaaaacacaaaagtaCATTGTGTTTTATGTCCGCGTAACCCTGATGGTGGAAAAAGCATAGTTCAAGGTTTCCAAATTTCAACTATGTTCACTCATCACCAAAAGACTATAGTTGTTGATGGCCATCATGTTGAAGAATCACAGAAGCGAACCGTTATAAGTTTCATAGGTGGTATTGATCTGTGTGATGGAAGATATGATACCATGGAACACCCTTTGTTTTCAACATTGAATACAATCCATCATGATGATTTTCATCAACCGAATTTCCCAGGTGCTTCTATTAAGAAAGGCGGTCCTAGAGAACCGTGGCATGATATTCACTGCAAGCTAGAAGGACCTATTGCATGGGATGTGTTGTACAATTTTGAGCAGAGGTGGGAAAAGCAAGTTGGGAAGAAATTCTTATTCCCAATTGAAGTTCTTGACACAGTTCTAATCCACCCTTCTGATGCAATGATATCAGAAGAAGATGGAGACACTTGGAGTGTTCAGTTGTTTAGATCAATCGATGGTGGCGCTGTTTCGAACTTCCCTCAAGCACCGGATGAAGTTATTGAATTAGGCCTTGTTAGTGGGAAAGATAACATCATTGATAGAAGTATTCAAGATGGTTATATAAATGCTATTCGGCGAGCGAAAAACTTCATCTACATTGAAAATCAGTATTTCTTAGGGAGTTCATATGGTTGGCATGCAAGTGATATTAAAGTCGAGGATATTGGTGCTTTGCATCTCATACCAAAGGAGTTGTCATTGAAGATTGTTAGCAAAATTGAAGCTGGTGAAAGGTTTGTTGTGTATGTAGTGATTCCAATGTGGCCAGAAGGTATACCTGAAAGTGCCTCAGTTCAGGCAATATTAGATTGGCAAAGAAGGACCATGGAGATGATGTATTCTGACATTGCCGATGCCATAAAAAAGAAGAACATTGAAGCACACCCTCGcgattatttgacattttattgCCTTGGCAAAAGGGAAAGTAAGAAAGATGGAGAGTATACTCCTCCAGAGGAACCAGCGCCTGACAGTGACTATCACAGAACACAAAAGTCTAGGAGGTTCATGATCTATGTTCATTCCAAGATGATGATAGTTGACGATGAATACATAATCATTGGTTCAGCAAACATAAACCAAAGATCAATGGATGGAGCTAGAGACAGTGAGATTGCAATAGGTGCATTCCAACCACATCATATAGCATCCAATAATAAGCCACCAAAAGGACAAATATATGCATTCAGACGTTCACTATGGTATGAACACCTTGGAGATATTGGTGATACAAGTCACTTTGATAATCCAGAAAGTTTGAATTGCATTAAGCTTGTGAATCGTTTTGCTGAGACCAATTGGGACATATACTCAAAGGATAAATTTGAtgacttcaaatattcttttcaCCACCTCATGAGATATCCAATAGAAGTAACCAATAATGGAGCCATAACAAGTCTTCCTGGATTTGAATGTTTTCCTGATACTAAGGCTAGGATTTTGGGTTCAAAATCTGATTATCTTCCTCCAATTCTCACCACTTAA 2472 0.3823 MPQLLHGTLKVTISEVDRLQAGCNLDFCRKGTTNKGKRFLAQVKGCLLCRPEIVGTRLYATVDLDKARVGRTRMIGNQPSNPKWNETFEIYCAHYISHIVFTVKDDNPIGATLIGRAYIPAEKVLKGPIINRWVEILDEEDHRPVSGGSKIRVSIQFSSVTEDRNCLWSQGIHMPYLGVSRTFFDQRQGCSVTLYQDAHVPDSVHPWIPISGTKYYVPGRCWEDIYNAIMDAKLFIYITGWSVHTEITLIRDPNKPTETSITLGEMLKRKANEGVNVLMLVWDDRTSVPGFKKDGLMGTHDQETAEYFKNTKVHCVLCPRNPDGGKSIVQGFQISTMFTHHQKTIVVDGHHVEESQKRTVISFIGGIDLCDGRYDTMEHPLFSTLNTIHHDDFHQPNFPGASIKKGGPREPWHDIHCKLEGPIAWDVLYNFEQRWEKQVGKKFLFPIEVLDTVLIHPSDAMISEEDGDTWSVQLFRSIDGGAVSNFPQAPDEVIELGLVSGKDNIIDRSIQDGYINAIRRAKNFIYIENQYFLGSSYGWHASDIKVEDIGALHLIPKELSLKIVSKIEAGERFVVYVVIPMWPEGIPESASVQAILDWQRRTMEMMYSDIADAIKKKNIEAHPRDYLTFYCLGKRESKKDGEYTPPEEPAPDSDYHRTQKSRRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGARDSEIAIGAFQPHHIASNNKPPKGQIYAFRRSLWYEHLGDIGDTSHFDNPESLNCIKLVNRFAETNWDIYSKDKFDDFKYSFHHLMRYPIEVTNNGAITSLPGFECFPDTKARILGSKSDYLPPILTT 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00650 823 Gene3D C2 domain 6 170 IPR035892 -
Tsu07g00650 823 SMART C2_3c 8 133 IPR000008 -
Tsu07g00650 823 CDD C2_plant_PLD 1 157 - -
Tsu07g00650 823 Pfam Phospholipase D C terminal 741 813 IPR024632 -
Tsu07g00650 823 SMART pld_4 336 373 IPR001736 GO:0003824
Tsu07g00650 823 SMART pld_4 664 691 IPR001736 GO:0003824
Tsu07g00650 823 ProSiteProfiles C2 domain profile. 1 134 IPR000008 -
Tsu07g00650 823 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 336 373 IPR001736 GO:0003824
Tsu07g00650 823 SUPERFAMILY Phospholipase D/nuclease 510 734 - -
Tsu07g00650 823 Gene3D Endonuclease Chain A 481 712 - -
Tsu07g00650 823 Pfam Phospholipase D Active site motif 336 373 IPR001736 GO:0003824
Tsu07g00650 823 Pfam Phospholipase D Active site motif 665 691 IPR001736 GO:0003824
Tsu07g00650 823 Pfam C2 domain 8 135 IPR000008 -
Tsu07g00650 823 SUPERFAMILY Phospholipase D/nuclease 180 445 - -
Tsu07g00650 823 PIRSF PLD_plant 1 823 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Tsu07g00650 823 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 159 IPR035892 -
Tsu07g00650 823 Gene3D Endonuclease Chain A 210 450 - -
Tsu07g00650 823 PANTHER PHOSPHOLIPASE D 3 823 IPR015679 -
Tsu07g00650 823 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 664 691 IPR001736 GO:0003824
Tsu07g00650 823 PANTHER PHOSPHOLIPASE D ALPHA 3 3 823 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00650 Tsu-Chr7 5145004 5166833 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00650 3 823 Phospholipase D Gene Family (Wang group) AT3G15730 64.140 0.0 1073
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00650 K01115 - gmx:100794115 1276.15