Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00625 ATGAAGGCTATGGCAAAGAAAAAGAATCCTCTGGTGTTTATGGACGTGTCTATTGATGGGGATCCTGTTGAAAGGATGGTTTTTGAGCTTTTCTACGACGTTGCTCCCAATACTGCAGAAAATTTCCGTGCATTATCTACAGGAGAGAGAGGTATCAGTCCTAATACTGGAAAATCGCTGCACTACAAGGGTTCTTTCTTCCACCGTGTTATAAAAGGCTCCATTGTGAAGGGTGGTGATTTTGTCAATCGTAATGGGACTGGTGGAGAAAGCATATATGGTTCAAATTTCCCAGACGAGTCACCTAGGCTTAAGCATGATGCCCCTGGGCTTTTGTCGATGGCGATTGCTGACCGGGACACACTTGGTTCTCATTTTATTATCACTTTGAAAGCAGATCACCATCTTGATAGGAAGCATGTAGTCTTTGGGAAGCTTGTTGAAGGTCTTCAAGTATTGAAGAGAATTGAAGATGTGGGTGATGATGATGGGCATCCAACCGTAACTGTTAAAATCATTAATTGTGGTGAATATAATGACGATGGGAAGAAGGAAACACGCAAGAAGGGAAAGCATAAAAGATCTTCAAAAGACCGACGGAAGAGGAGAAGATACCATTCATCTGAATCCGAGAGTTCTTCAGATTCAGACACAGAATCTTCAGAAACTGATAGTGATTCTGACTCAGATCTGTCTTCATCTGATATAAGTTCATCTAGTGACGACAGacgaagaaagagaaagagatctaagaaagataaatataaacGCGGAAAAAGGAGAGATAAACGCCGTGACAAAAGGCGAAGAAGAAGGGATAAGAGGTTGAAGCGTAGATCAAAAAGGGAATCTAACAGCGATTCAGATAGTGAGAGTAACAGTAGCTCTGATGGTGAAAGTCTTGATACTCAACAGAAAGAGCTGAAGCGAAAAGACCGTTCTCAGAAAAAAGCTGAAATGAAGTCTCTCTCACTTGTGGAGAAAGATGTACCTACCATCCATCATAAAAAGGAAGAGGTGGCTATGCCAGAGAGTAAGGAAACTATTGTTAAGGAAAATGGAGAGCGGCATAGCAATGGTACTGGAGTTGCCTATAGATCTGACAGAAGTGAAGAGAGGCAGCCTGACGTGATGGATGATCATTTGGGCAAATCTAGGAGTAGAAGCATTAGCCCTACTCGGCCCATGAGTAAGAGTATGAGTATTAGTCCTAGGAGGACTAGGAGCAAGAGCCGTAGCATTACCCCGAAAAGAAGATTGAGCAAAAGTCCCAGTTGTAGTAGAAGCCCTCCCCGTTCATCAAGGAGGAGTTTGAGCAGGAGTCCTGTCCGAAGCATCAGCAGGAGTCCTGCTAGAATAATCGGCAGGAGTCGAAGCAGAAGCATTAGCAGGAGCCCAGTAAGGGGCAGGAAGGGGAGAAATGTCAGTAGAAGTCCTGTGATAAGTCGTCCTCTTAAAAGTGTCAGCAAGAGCCCCGTAAGATCCCGCCGGAGCAGGAGTTCTCCCAGAGCATCATCACGAAAAGCAATCAGCAGAAGCCCTGTAAGAGTGTCAAGAAAGAGTGTAAGTCGCAGTCCAGTTAGATCACCTGCAAGAAGCTTAAGCAAAAGCCCGGTAAGAGTGTCAAGAAAGAGTTTAAGTCGCAGTCCAGTTAGATCAACTGCAAGAAGCTTAAGCAGAAGCTCTGGTAGGGTCCCATCAAAGAGAAGCATTAGCCGGAGCCCCATCAGGGCACCCAGTAGAAGCAATCGCCGCAGTTATTCTAGGAGTCCAAGCCCTGTACGTAGAAGAACATCTCGTGGTGGTAGTTTGTCTAGGAGTGCTTCACCTGATGCTTCGCCAAAGCGTATTAGAAGGGGAAGAGGTTTCAGCGAACAATACTCCTTTGCAAGAAGGTATAGAACCCCTTCTCGGTCTCCTGTGAGGTCATACCGGTACAATGGAAGAAATGATCGTGACAGATATTCAAATTACAGAAGGTATTCCCCTAGGCGTTTTAGAAGCCCACCACCACGTAGAAGAACTCCTCCAAGGTACCGAAGGAGGAGCAGAACACCATCTGTTTCACCCAACCCACGCTACCGAGCTCGGCAATATAGCAGAAGCCGCAGCCCAGTTCGCATTCGTTCCCCAGTTAGGAGTACTTCACCAGATCGATCTCGCCCGTCTCCTCGTGTAGAAAGGCATTCATCATATTCCCGGAGCAGGAGCAGGACTCCAGCGAAATCTAGGTCTTATGTAGAATCACCATCTCCACAAAAAGCAAGTAGAGACAGAAGGTCAGGGTCATCATCCAGAAGCCCAGATGGAAAGAAAGGCTTGGTCTCATATGGTGATGGTTCTCCCGACTCAGGCCAAAGGTGA 2364 0.4543 MKAMAKKKNPLVFMDVSIDGDPVERMVFELFYDVAPNTAENFRALSTGERGISPNTGKSLHYKGSFFHRVIKGSIVKGGDFVNRNGTGGESIYGSNFPDESPRLKHDAPGLLSMAIADRDTLGSHFIITLKADHHLDRKHVVFGKLVEGLQVLKRIEDVGDDDGHPTVTVKIINCGEYNDDGKKETRKKGKHKRSSKDRRKRRRYHSSESESSSDSDTESSETDSDSDSDLSSSDISSSSDDRRRKRKRSKKDKYKRGKRRDKRRDKRRRRRDKRLKRRSKRESNSDSDSESNSSSDGESLDTQQKELKRKDRSQKKAEMKSLSLVEKDVPTIHHKKEEVAMPESKETIVKENGERHSNGTGVAYRSDRSEERQPDVMDDHLGKSRSRSISPTRPMSKSMSISPRRTRSKSRSITPKRRLSKSPSCSRSPPRSSRRSLSRSPVRSISRSPARIIGRSRSRSISRSPVRGRKGRNVSRSPVISRPLKSVSKSPVRSRRSRSSPRASSRKAISRSPVRVSRKSVSRSPVRSPARSLSKSPVRVSRKSLSRSPVRSTARSLSRSSGRVPSKRSISRSPIRAPSRSNRRSYSRSPSPVRRRTSRGGSLSRSASPDASPKRIRRGRGFSEQYSFARRYRTPSRSPVRSYRYNGRNDRDRYSNYRRYSPRRFRSPPPRRRTPPRYRRRSRTPSVSPNPRYRARQYSRSRSPVRIRSPVRSTSPDRSRPSPRVERHSSYSRSRSRTPAKSRSYVESPSPQKASRDRRSGSSSRSPDGKKGLVSYGDGSPDSGQR 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00625 787 MobiDBLite consensus disorder prediction 366 387 - -
Tsu07g00625 787 MobiDBLite consensus disorder prediction 720 734 - -
Tsu07g00625 787 MobiDBLite consensus disorder prediction 736 752 - -
Tsu07g00625 787 MobiDBLite consensus disorder prediction 645 660 - -
Tsu07g00625 787 Gene3D - 1 178 IPR029000 -
Tsu07g00625 787 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 ISOFORM X1 4 183 - -
Tsu07g00625 787 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 ISOFORM X1 188 315 - -
Tsu07g00625 787 MobiDBLite consensus disorder prediction 244 279 - -
Tsu07g00625 787 MobiDBLite consensus disorder prediction 504 610 - -
Tsu07g00625 787 MobiDBLite consensus disorder prediction 215 229 - -
Tsu07g00625 787 SUPERFAMILY Cyclophilin-like 4 180 IPR029000 -
Tsu07g00625 787 MobiDBLite consensus disorder prediction 178 787 - -
Tsu07g00625 787 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 30 45 IPR002130 GO:0000413|GO:0003755
Tsu07g00625 787 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 67 79 IPR002130 GO:0000413|GO:0003755
Tsu07g00625 787 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 110 125 IPR002130 GO:0000413|GO:0003755
Tsu07g00625 787 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 125 137 IPR002130 GO:0000413|GO:0003755
Tsu07g00625 787 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 138 153 IPR002130 GO:0000413|GO:0003755
Tsu07g00625 787 MobiDBLite consensus disorder prediction 682 719 - -
Tsu07g00625 787 MobiDBLite consensus disorder prediction 302 354 - -
Tsu07g00625 787 MobiDBLite consensus disorder prediction 388 409 - -
Tsu07g00625 787 MobiDBLite consensus disorder prediction 187 203 - -
Tsu07g00625 787 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 4 183 - -
Tsu07g00625 787 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 188 315 - -
Tsu07g00625 787 MobiDBLite consensus disorder prediction 418 462 - -
Tsu07g00625 787 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 13 177 IPR002130 GO:0000413|GO:0003755
Tsu07g00625 787 Coils Coil 301 321 - -
Tsu07g00625 787 MobiDBLite consensus disorder prediction 665 681 - -
Tsu07g00625 787 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 14 176 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00625 Tsu-Chr7 4966681 4973301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00625 29 173 U-box Gene Family AT5G67530 40.816 9.28e-21 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00625 K09566 - gmx:100785820 328.946
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00625 07 4966681 4973301 Tsu07g00625 07 4966681 4973301 ECH