Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00618 ATGATGCATGAAAGCAACGACAATGCCTTAGGTGATGATAAGAGAAACCTTCTAAACATGTTGCGTGAAAGCAACGACAATGCCTTAGGTGATGATGAGAGAAACCTTCTTCTAAACATGATGGAAAATGATAACGGTGATGATTTTCTCTCGGATCGGCGCAATGTTTTTCTCCCGGATCAGGCCGATGGCAGCCAATACAGCCTCATGGATTTTCCCCTCCCTAACTTGAGCAGCAACAGATTAAGCTTTAGGAGGAGTAGACTCCCCAAGAATGTTATCTCTCCCCAAGCCCGATATTACAGGTGGTGGCAGATGTTTTTGGCGCTTTTAGTTTTCTACACTGCATGGATGTCACCATTTGAACTTGGGTTCTTGAGTGAACGTTCGTTACCTCTTTCGGTTATCGATAATGCTgtgaatgttttatttttcgGTGATATTGTGTTAACCTTCTTTGTTGCGTATTTTGATGAAGATACATGTTTGCTTGTGGATAAACATGGGCAAATTGCGATGAGATATCTGAAAACATGGTTTCTATTTGATCTCATTTCCACAATTCCTTACGAACTTGTCAACCGATTGTTGCCTGAGGACATCAGATCTTATGGCTACTTCGGTATGCTTCGCCTTTGGCGTCTTCATAGAGTCAGTGCCTTGTTTGCAAGATTAGAAAAGGACAGACATTATAACTACTTCTTCTTGCGGTGTTTAAAGCTTATATGTGTTACTCTATTTACAACACATTTTGGTGCCTGCATTTTGTTCTTTCTTGCCAACCGTTTTTCTGAAGACCGGAGTGCAACATGGCTTGGGCTTGTTTCTGATGTGGATGACAAGAGTACCATAGCTCTCTACATAACATCATTATATTGGGCTATAATCACACTTTCAACACTTGGTTATGGTGATCTACATGCTGTAAATTCAAGGGAGATGGTGTTTTTGATTTTCTATATGCTCTTAAATGTGGCACTTACCTCATACCTCATTGGAAACATGACAAATTTAGTTGTTCATTCCACAAGCAGAACTAGGAAATATAGGGACACAGTGAAAGCTGCTACAAAATTTGCTCATCGAAATAGAATACCTACCCGGTTGGAAGAACAGATGCTTGCTCAGTTGCTTATGAAGTATAGAACTGATTTAGAAGGAGTGCAGCAACAAGATGTTATTGATTCCCTTCCGAAAGCAATTCGAGCTAGTGTCTACTACTGCTTATTCTATCCAATAATGAACAAAGTATTCCTGTTTGCAGGAGTGTCAACAGACCTCATTTTTCAATTgGTCACGGAGATGAAGGCGGAGTATTTTCCTCCAAAGGAAGATGTTGTTTTGGAGAATGAAGCACCAACAGACTTTTATATCCTTGTCACTGGTGGTGCAGAACTTATCAAACGAGTGAATGGAGTAGAACAGGTCGTTGGTAAGATACATGCAGGAGAGTTAGTTGGCGAAGTAGGAGTTCTAGGTTACATACCGCAGCCATATTCATCCCGAACTACTCGATTGAGCCAAATTTTGCGCTTGGAGCGTACTACATTTCTAAACCATGTTCGTACAAGTGTTGGAGATGGGGCAATAATCATGAACAATTTTCTCAATTATGTGGAAACTTCCAGTATTCTAGGGATGGGTGCTATTTTTGCAGAAATAATGGTCTTGTTGGCTCATGGTAAAACCGATCTGCCTATCAGCACCTGCTTTGCAGTAACAAGAAATGACAATATATTGTTACGTCGGTTGCTGAACAAGGGTTCAGATCCAAATGAAGCAGACAGAAAAGGAAGGACAGCATTGCATATCGCAGCTTCTAATGGCTACGAGAATTGTGTAACTTTGCTTTTACAGTTTGGTGCTGATCCAAATAGAAAAGATTTGGATGGCAATATCCCATTATGGGAAGCAATGAGTGGAGGACATAAATTTGTCAAGAAACTTCTCATAGACAATGGTGCAAACATATTTTTTACCGATGTAGTGCAATTAGCATGCGTTGCAGCTCGGAAAAATAACACTGAATTGCTCACGGAACTCGTAGAACTCGGTGTGGATGTGACAAAATCCGAAAGAAGCGGAACCACTGCCCTCCATACAGCAGTAACTGAAGGAAATGTAGAGATAGTGAAGCTACTTGTAGACCTTGGAGCTGAAGTTGATAAGGAAGATAATGGTGGCTGGACTCCAAGGGTTTTGGCGGAACAACAAGGCCacgaaaaaattaaaaatatatttcagaAAATTAAAGAGAACAAACAAAGCACACCTGTTATTCCAATATCAGATAATGGTAAGCCTAATGTGTCTTACACAGGAAATCTTCAAAGTGAACCTGTTATGCCTGATATTGGTGGATCCCAAGAATGCTTGATACCACCGCATATTCAAGACGAGTTGCCATGTTTAGATGATCATCAAAGACGAAGGACGACCAACACctataataattcaattttcgGGATGATCTCTGCTGCTAATCATAAATATCGTGAGGCGTATGAAAGAAACACTGATAATGCTGCGAACATGAATGAATTATTAGCTAGAGTGACACTTAGTTGTCCTGAAATAGGTGAACATGGAAAGCTTATTTTTCTGCCCAAGTCCCTTGAAGAACTGCTAGACATTGGTGCCAAAATGTTTGATTTCTCACCCACCAAAATTTTGACCAAAGAAGGAGCTGAAATCGATGATATAGATCTTATAAGAGATGGTGATCACCTTATTATTGCAAATGACTAA 2748 0.3959 MMHESNDNALGDDKRNLLNMLRESNDNALGDDERNLLLNMMENDNGDDFLSDRRNVFLPDQADGSQYSLMDFPLPNLSSNRLSFRRSRLPKNVISPQARYYRWWQMFLALLVFYTAWMSPFELGFLSERSLPLSVIDNAVNVLFFGDIVLTFFVAYFDEDTCLLVDKHGQIAMRYLKTWFLFDLISTIPYELVNRLLPEDIRSYGYFGMLRLWRLHRVSALFARLEKDRHYNYFFLRCLKLICVTLFTTHFGACILFFLANRFSEDRSATWLGLVSDVDDKSTIALYITSLYWAIITLSTLGYGDLHAVNSREMVFLIFYMLLNVALTSYLIGNMTNLVVHSTSRTRKYRDTVKAATKFAHRNRIPTRLEEQMLAQLLMKYRTDLEGVQQQDVIDSLPKAIRASVYYCLFYPIMNKVFLFAGVSTDLIFQLVTEMKAEYFPPKEDVVLENEAPTDFYILVTGGAELIKRVNGVEQVVGKIHAGELVGEVGVLGYIPQPYSSRTTRLSQILRLERTTFLNHVRTSVGDGAIIMNNFLNYVETSSILGMGAIFAEIMVLLAHGKTDLPISTCFAVTRNDNILLRRLLNKGSDPNEADRKGRTALHIAASNGYENCVTLLLQFGADPNRKDLDGNIPLWEAMSGGHKFVKKLLIDNGANIFFTDVVQLACVAARKNNTELLTELVELGVDVTKSERSGTTALHTAVTEGNVEIVKLLVDLGAEVDKEDNGGWTPRVLAEQQGHEKIKNIFQKIKENKQSTPVIPISDNGKPNVSYTGNLQSEPVMPDIGGSQECLIPPHIQDELPCLDDHQRRRTTNTYNNSIFGMISAANHKYREAYERNTDNAANMNELLARVTLSCPEIGEHGKLIFLPKSLEELLDIGAKMFDFSPTKILTKEGAEIDDIDLIRDGDHLIIAND 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00618 915 SUPERFAMILY Ankyrin repeat 571 748 IPR036770 -
Tsu07g00618 915 PANTHER POTASSIUM CHANNEL AKT1 32 914 IPR045319 GO:0005249|GO:0006813
Tsu07g00618 915 ProSiteProfiles Ankyrin repeat region circular profile. 597 628 - -
Tsu07g00618 915 SUPERFAMILY cAMP-binding domain-like 344 536 IPR018490 -
Tsu07g00618 915 ProSiteProfiles Ankyrin repeat profile. 597 629 IPR002110 GO:0005515
Tsu07g00618 915 ProSiteProfiles Ankyrin repeat profile. 694 726 IPR002110 GO:0005515
Tsu07g00618 915 PANTHER INWARDLY RECTIFYING POTASSIUM CHANNEL SUBUNIT 32 914 - -
Tsu07g00618 915 SUPERFAMILY Voltage-gated potassium channels 97 340 - -
Tsu07g00618 915 SMART ANK_2a 661 690 IPR002110 GO:0005515
Tsu07g00618 915 SMART ANK_2a 694 723 IPR002110 GO:0005515
Tsu07g00618 915 SMART ANK_2a 560 593 IPR002110 GO:0005515
Tsu07g00618 915 SMART ANK_2a 597 626 IPR002110 GO:0005515
Tsu07g00618 915 SMART ANK_2a 630 659 IPR002110 GO:0005515
Tsu07g00618 915 PRINTS EAG/ELK/ERG potassium channel family signature 137 147 IPR003938 GO:0005249|GO:0006813|GO:0016020
Tsu07g00618 915 PRINTS EAG/ELK/ERG potassium channel family signature 331 340 IPR003938 GO:0005249|GO:0006813|GO:0016020
Tsu07g00618 915 PRINTS EAG/ELK/ERG potassium channel family signature 114 121 IPR003938 GO:0005249|GO:0006813|GO:0016020
Tsu07g00618 915 PRINTS EAG/ELK/ERG potassium channel family signature 287 304 IPR003938 GO:0005249|GO:0006813|GO:0016020
Tsu07g00618 915 PRINTS EAG/ELK/ERG potassium channel family signature 313 324 IPR003938 GO:0005249|GO:0006813|GO:0016020
Tsu07g00618 915 ProSiteProfiles Ankyrin repeat region circular profile. 694 726 - -
Tsu07g00618 915 Gene3D - 566 749 IPR036770 -
Tsu07g00618 915 Gene3D - 102 341 - -
Tsu07g00618 915 Pfam KHA, dimerisation domain of potassium ion channel 851 912 IPR021789 -
Tsu07g00618 915 PRINTS Ankyrin repeat signature 598 613 IPR002110 GO:0005515
Tsu07g00618 915 PRINTS Ankyrin repeat signature 710 724 IPR002110 GO:0005515
Tsu07g00618 915 ProSiteProfiles Ankyrin repeat profile. 630 662 IPR002110 GO:0005515
Tsu07g00618 915 Pfam Ankyrin repeats (3 copies) 668 744 IPR002110 GO:0005515
Tsu07g00618 915 Pfam Ankyrin repeats (3 copies) 572 659 IPR002110 GO:0005515
Tsu07g00618 915 Pfam Ion transport protein 101 346 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Tsu07g00618 915 SMART cnmp_10 419 536 IPR000595 -
Tsu07g00618 915 CDD CAP_ED 419 519 IPR000595 -
Tsu07g00618 915 ProSiteProfiles cAMP/cGMP binding motif profile. 419 517 IPR000595 -
Tsu07g00618 915 Pfam Cyclic nucleotide-binding domain 439 521 IPR000595 -
Tsu07g00618 915 Gene3D Jelly Rolls 385 540 IPR014710 -
Tsu07g00618 915 ProSiteProfiles KHA domain profile. 851 915 IPR021789 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00618 Tsu-Chr7 4919217 4923793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00618 65 915 Ion Channels AT2G25600 52.662 0.0 878
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00618 K21867 - gmx:100786870 985.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00618 07 4919217 4923793 Tsu07g00618 07 4919217 4923793 ECH
Tsu01g00706 01 6202535 6206910 Tsu07g00618 07 4919217 4923793 PCT