Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00617 ATGTACATTTATCTCTATACTTTCTGCAAAAATACACCTGAGTTGGGTACCAAGCTCTTTCTAGCTTGGGCTGGCTGGGTTTGTGTTTGGACAGCACTCATGTTAATTTTGCTTGCAATTTTTAATGCTTGCAATATTATCACTAGATTTACAAGAATTGCAGAAGAGTTATTTGGCATGCTAATCACTGTTCTTTTCTTTCAAGAGGCTATAAAGGGACTGATAGGCGAGTTTGGCGCTCCCAAGGGTGAGAAATCTTCCTCAGAGGAACTTCAAACCCAATGGCGGTATACAAATGGATTACTTGCAGTCATTTTCGCTTTTGGACTAATTGTCACCGCACATAAAAGCAGAAGAGCAAGATCATGGCAATATGGAACAAGGAAGCTACGAGGCTTTATTGCAGATTATGGTGTTCCAGTGATGGTAGTGTTGTGGACTGCAGTATCTTATGCAAAGCCATCCTACGTTCCAGAGAGTGTTCCTAGAAGGCTGTTTTGTCCACTTCCATGGGAACCTGCTTCTCTTTATCACTGGACAGTAATGAAGGATATGGCGAAGGTACCGGtggtttatatatttttggcaATTATTCCAGCTTTGATGATAGCAGGTTTATACTTTTTCGATCATAGTGTGGCTTCTAAGATGGCACAACAGAAAGAATTCAACCTTCAAAAGCCATCTGCATACCATTATGATATTTTCCTACTTGGAGTACTGACTCTGATTTGTGGTCTCCTTGGCCTTCCTCCTTCAAATGGAGTCCTTCCACAGTCCCCCATGCATACAAAGAGTTTGGCGGTTCTTAGGAGGCAGCTAATCCGAAAGAAGGTTGTGCAAAGTGCCAAGGAATGCATTCTACAACAGGGTACCAGCTCTGAATTATACGGGAAAATGCAAGCTGTGTTCGTTGAAATGGATACAGCCCCTACTGATAAAGAATTAGAGACTTTGAAAGAAGTTGTAATGAGATCTAATACCAAGGCTCGTTCAACGGAACATTTTGATCCTGAGAAATACATAGATGCTTCTTTACCAGTCCGGGTTAATGAACAAAGAATGAGCAACTTTTTGCAGTCCCTCCTGATTGGTGCATCAATAGTAGGCATCGCCCTTATCAAAAAGATTCCAACTTCACTTTTATGGGGATATTTTGCGTACATGGCTATTGATAGTCTTCCAGGGAACCAGTTCTGGGAAAGGATATTGCTCCTCTTCATCGCCCCAAGCCGCCGTTACAAAATTTTGCAAGGTTCACATGCCTCATTCGTGGAGTCGGTACCATTCAAGACCATCGCTGGATTTACAGCCTTACAGTTGGCATATTTTCTGTTCTGTTTCGGGGTCACATGGATACCTATTGGTGGAATATTGTTTCCGCTACCATTTTTCCTTCTCATAGTTTTAAGAGAACACTTGCTACCAAGGCTATTCGATCCTAACCATCTTCAGGAACTAGATGCTTCTGAGTATGAGGAAATTATCGGCGCTCCACGTGGAGCACGTTTGACACTAGGGgaTAATGAGCCACGTGATGGTGATACCGATGGAAGCTCAGAAGATTTCTATGATGCAGAGCTATTGGATGAGATGACAACCAGCAGAGGAGAGTTGAAACTTAGAACTGTAAGCTTCAGTAGTGAACGAAATCGCAGTATCAGCTTCAATGAAGAGAGACACATCTAA 1689 0.4192 MYIYLYTFCKNTPELGTKLFLAWAGWVCVWTALMLILLAIFNACNIITRFTRIAEELFGMLITVLFFQEAIKGLIGEFGAPKGEKSSSEELQTQWRYTNGLLAVIFAFGLIVTAHKSRRARSWQYGTRKLRGFIADYGVPVMVVLWTAVSYAKPSYVPESVPRRLFCPLPWEPASLYHWTVMKDMAKVPVVYIFLAIIPALMIAGLYFFDHSVASKMAQQKEFNLQKPSAYHYDIFLLGVLTLICGLLGLPPSNGVLPQSPMHTKSLAVLRRQLIRKKVVQSAKECILQQGTSSELYGKMQAVFVEMDTAPTDKELETLKEVVMRSNTKARSTEHFDPEKYIDASLPVRVNEQRMSNFLQSLLIGASIVGIALIKKIPTSLLWGYFAYMAIDSLPGNQFWERILLLFIAPSRRYKILQGSHASFVESVPFKTIAGFTALQLAYFLFCFGVTWIPIGGILFPLPFFLLIVLREHLLPRLFDPNHLQELDASEYEEIIGAPRGARLTLGDNEPRDGDTDGSSEDFYDAELLDEMTTSRGELKLRTVSFSSERNRSISFNEERHI 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00617 562 Coils Coil 554 562 - -
Tsu07g00617 562 PANTHER ANION EXCHANGE PROTEIN 1 561 IPR003020 GO:0005452|GO:0006820|GO:0016020
Tsu07g00617 562 Pfam HCO3- transporter family 348 438 IPR011531 GO:0006820|GO:0016021
Tsu07g00617 562 Pfam HCO3- transporter family 93 272 IPR011531 GO:0006820|GO:0016021
Tsu07g00617 562 Pfam HCO3- transporter family 5 78 IPR011531 GO:0006820|GO:0016021
Tsu07g00617 562 PANTHER BORON TRANSPORTER-LIKE PROTEIN 1 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00617 Tsu-Chr7 4913609 4917682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00617 1 561 Antiporters AT4G32510 64.049 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00617 K24194 - gmx:100787412 860.522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00617 07 4913609 4917682 Tsu07g00617 07 4913609 4917682 ECH
Tsu07g00617 07 4913609 4917682 Tsu01g00707 01 6208259 6213531 ECH
Tsu01g00707 01 6208259 6213531 Tsu07g00617 07 4913609 4917682 PCT