Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00611 atggaagaaattgaAGGTAGAAACTCTAGTGAAACTAGACCACCACATCCTAATCCATCTATTACTTCTGCATTTCGTCAATGTCAACGCAATGATCCTGTCATTTTACCATGCAGAAAATCCCTTGTCCGTCACGCTTCTCTTCAGACTAAAATGAAGTTGTCAGCTGAGGATGTTACTGAAGATTGCCAGACTGATTTCCTTCCAAACATTCGTTCGGGAGGATATGCTGATATTGGGTTCCGGTCAAGTATGGAGGATGTGTATATTTGTGTTGACAACTTTATGCAGGAGCATGGGCTCAACAGACATATAGATGGACCGAGCGCTTTCTATGGGGTGTTTGATGGACACGGTGGAAAGCATGCAGCTGACTTTGCTTGCAATCATTTGCCAAAGTTCATTCTTGAGGATAAAGATTTCCCAGTTGATATCGAAAGGATAGTTGCTTCAGCCTTTCTTCAAACAGACAATGCATTTGCAGAAGCTTGTTCTCTCGATGCTGCCCTTGCCTCTGGCACCACTGCACTGGCTACTCTTATTTTGGGAAGGTTGCTGGTGGTGGCAAATGCTGGAGATTGTCGAGCAGTGCTGTGCCGTCGTGGAAAAGCAATTGACATGTCAAGAGACCACAAACCAGTTTGCATGAAAGAACAGAGGCGTATTGAGGCATCTGGGGGGTATGTCTACGATGGATATCTTAACGGGCAACTTAATGTTGCTCGAGCTATTGGTGACTGGCACATGGAAGGAATGAAATGCAAAGATGGTGGGCCACTAAGTGCAGAGCCCGAACTCATTACTACAAAACTTACTGCTGAGGACGAATTTCTCATCATAGGCTGCGATGGGATTTGGGATGTTTTTAGAAGCCAAAATGCTGTAGATTTTGCTCGGCGCCGGCTTCAGGAGCATAATGACCCAGCCGTGTGTAGTAAGGATCTGGTTGATGAGGCTTTGAAGAGAAAAAGTGGAGACAATTTAGCTGCTGTTGTGGTTTGCTTTCAGCAGCATCCTCCTCCGAATTTGGTAGCACCACGCTCCAGAGTGCACAGAAGCTTCTCTGCTGAAGGTTTGAAGGAGTTGCAAAGCTTTTTGGACAGTTTGGAAAAATGA 1116 0.4489 MEEIEGRNSSETRPPHPNPSITSAFRQCQRNDPVILPCRKSLVRHASLQTKMKLSAEDVTEDCQTDFLPNIRSGGYADIGFRSSMEDVYICVDNFMQEHGLNRHIDGPSAFYGVFDGHGGKHAADFACNHLPKFILEDKDFPVDIERIVASAFLQTDNAFAEACSLDAALASGTTALATLILGRLLVVANAGDCRAVLCRRGKAIDMSRDHKPVCMKEQRRIEASGGYVYDGYLNGQLNVARAIGDWHMEGMKCKDGGPLSAEPELITTKLTAEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPAVCSKDLVDEALKRKSGDNLAAVVVCFQQHPPPNLVAPRSRVHRSFSAEGLKELQSFLDSLEK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00611 371 MobiDBLite consensus disorder prediction 1 24 - -
Tsu07g00611 371 Gene3D - 50 339 IPR036457 -
Tsu07g00611 371 ProSiteProfiles PPM-type phosphatase domain profile. 72 335 IPR001932 -
Tsu07g00611 371 SUPERFAMILY PP2C-like 66 337 IPR036457 -
Tsu07g00611 371 PANTHER PROTEIN PHOSPHATASE 2C 56 357 IPR015655 GO:0004722|GO:0006470
Tsu07g00611 371 CDD PP2Cc 71 335 IPR001932 -
Tsu07g00611 371 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 56 357 - -
Tsu07g00611 371 Pfam Protein phosphatase 2C 80 327 IPR001932 -
Tsu07g00611 371 SMART PP2C_4 62 333 IPR001932 -
Tsu07g00611 371 ProSitePatterns PPM-type phosphatase domain signature. 111 119 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00611 Tsu-Chr7 4868030 4870997 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00611 6 369 PP2C-type Phosphatase Gene Family AT2G25620 66.138 0.0 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Tsu07g00611 PP2C 6.9e-69 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00611 K14803 - gmx:100804558 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00611 07 4868030 4870997 Tsu07g00611 07 4868030 4870997 ECH