Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00607 ATGGCGATGCTGAGAATGGTTAACTCAAACTCACACtctcacaacaacaacaacaacaatgacAACAACACTCACTTGTTCAAACCAGTACTCCGTGATTTTCTCGGCATGAAACCTACTGATATTCCCACCGACCTTAGGTTACCGGAGGCATCAGCCTCAGCTTCCTCCGCCGGTGCTCGTGGCCCTTTCTCCTCCACTTCTGAAACTGCTTCTGAAAAGCAGGTATCGAATCATCTCGAGGGAGTTCCATATTATGGTCCAAGAAGTGATTTTTCTGGCACTGAGATAAGTAATAGATTAGTGGGGAATAAGAGAAGTAATTCTGATTCTTCATTTATGGGTTCCTCTAGAGATGCCTTTCAAATGGTCCCTGATTCCTTCCAAAACTCACATTTGATGAAGGTCCTCCGAAATGCGTCTGGAGGAGAAAGGTCTAGAAGGCCTAATGATGATGAAGTGTTGCTTAGTATGCAGTCAATGAAGCCATCTTCTAGTTCTCAGATATTTCATCCTCCCGCCAACACTAAGTTTGATGGGAATAAATGGGAAAGGTCTATTCTCATGAATGCTGGCCCTTCCGTACAACATCCTCTGCGTGGAGGACAATTGACTCCTTTTGCACACCAATTAGCTTCAAACAAGATTAGAGATGCCAATGCCGGCCCTTCATTTATCTCTCAGTCTGCTGCTGATGAAGGATCAAGAACTGGAATCAAGGGCCCTGGAATTTTAAGTTCCATAAACACAGGTGCTACTACTACTACTGAGAAAATTTCATCTGCAGTATTGCTTGGTGGAAGCAGGCCAAAGCCTCTAACTAATATAGTAGAATCCTCCACACCCCCAAGCAGCCAGCATGGGCTAACACCTACTAGCCGCCAGATGACTATCTTTTACGGAGGTCAAGCTCATGTTTTTGATGATGTTCATCCACACAAGGCAGATGTTATAATGGCTTTAGCTGGATCAAATGGTGGATCTTGGTCAACAACATTCTCGCCGAAATCTGCTGCAAAGTTGGTTAATGATAGTAACTTGCATAGTGGAGAAAATGAAACAGGATTAGTGAGTAATGTGGCATTCCCACAAGAGCTTCATGGGAAGCTGTCTGTTGCTGGCAGTTCTAGTCGTGCCGTTGGGCCTAGTGATCGTGTGTATACTCCAGCCGGGGCACACCAAGGAAGCATTTTTGCTAAAGATACGAGAAATCCGGTTCAACCAGTCGATCCCAATTCCGAAGACAAAAGACCACAGTGA 1260 0.4397 MAMLRMVNSNSHSHNNNNNNDNNTHLFKPVLRDFLGMKPTDIPTDLRLPEASASASSAGARGPFSSTSETASEKQVSNHLEGVPYYGPRSDFSGTEISNRLVGNKRSNSDSSFMGSSRDAFQMVPDSFQNSHLMKVLRNASGGERSRRPNDDEVLLSMQSMKPSSSSQIFHPPANTKFDGNKWERSILMNAGPSVQHPLRGGQLTPFAHQLASNKIRDANAGPSFISQSAADEGSRTGIKGPGILSSINTGATTTTEKISSAVLLGGSRPKPLTNIVESSTPPSSQHGLTPTSRQMTIFYGGQAHVFDDVHPHKADVIMALAGSNGGSWSTTFSPKSAAKLVNDSNLHSGENETGLVSNVAFPQELHGKLSVAGSSSRAVGPSDRVYTPAGAHQGSIFAKDTRNPVQPVDPNSEDKRPQ 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00607 419 Pfam tify domain 291 323 IPR010399 -
Tsu07g00607 419 MobiDBLite consensus disorder prediction 1 25 - -
Tsu07g00607 419 MobiDBLite consensus disorder prediction 373 419 - -
Tsu07g00607 419 SMART tify_2 289 324 IPR010399 -
Tsu07g00607 419 ProSiteProfiles Tify domain profile. 289 324 IPR010399 -
Tsu07g00607 419 PANTHER PROTEIN TIFY 8 58 417 - -
Tsu07g00607 419 MobiDBLite consensus disorder prediction 50 116 - -
Tsu07g00607 419 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 58 417 IPR040390 -
Tsu07g00607 419 MobiDBLite consensus disorder prediction 58 77 - -
Tsu07g00607 419 MobiDBLite consensus disorder prediction 92 116 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00607 28 322 Tify Gene Family AT4G32570 39.809 4.40e-49 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Tsu07g00607 tify 2.4e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00607 - - gmx:100819293 632.869