Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00605 ATGAGTAAATCAAAGAGTAGTACTTTGTGTGCCAAAGATGAAGAGCGTCCACTTAGAATCACTAGATCAAGAGCAAGGGTTTTGGAATCCTCATCCAAAAATGTTCACATAGTAGAAAATTCCAaaaaggttgttgttgtttcttctGAGAATAAAACATGTGTTGTTGATGTTCCTAATGTTGTTCCTCACCGTAAGAGAAGGGCAGCGTTTACTGATGTAACTAACATCACCACTAAACTTCATGATAAACGTGTTAAACATTCTAAAGTTCAGACCAAAGGAGTTTACCAGAAGAAGAACACAAAGCTGACTTCAGATGTTACCGCCGAAGTTTCGTCGGTACAAGAGGATGTTAAAGGGAAGTTAACTGAAGAACTGTCTACCATAAAGATGGTAGAGTCAAATGATACCATTACTGCAGTAACTTTGGTTCAAGAACCAGCTGAACATTGTATGTCCAACAACATAACAGAACATGTTACGACAGACACCGCTGTTTCAATGCAAGGATCTGTGAATGCTGGTGAACTGTCAATCTCTCCTAGTCCAAACAAAGATATAAACATGACTTGTGAGAAGGTAGGAGCCTCAAATTTCTTGACCATTGTGGACATTGATAAAGAGTTAAAGGATTCTGAAGTTTGGAGTGCTTATGCACCTGATATATACAGCAAAGTTCGAGTCGCCGAGCTTGAAAAGAGACCATCAACAAATTACATGGAGAAGTTGCAGCAAGATATTTCTCCAAGCATGCGCGGAATTCTGATTGATTGGCTTGTGGAGGTCACTGAGGAATATAAGTTGGTTCCAGACACTCTTTACCTTACTGTGAACCTCATCGATCGGTTTCTCTCAACAAAATTGATTCAGAAACACCGGCTCCAGTTGCTTGGTATTACTTGCATGTTCATTGCATCAAAGTACGAAGAGATCTGTGCTCCTCGAGTGGAAGAATTTTGCTTCATCACAGATAATACATACACAAAACAAGAGGTAGTGAAAATGGAGAAAGAAGTTCTAAACCTTCTGCGTTTTCAGTTATGTGTTCCTACAACCAAAACATTTCTCAGGAGATTCATCCAAGCAGCACAATCTTCTTACAAGGATCCTCGCATTGAACTAGAATTCCTGGCAAACTATTTAGCCGAGCTTACTCTTGTCGAATACAGCTTCTTACAATTTCTACCTTCTCTTGTGGCTGCTTCTGCTGTATTCCTTGCCAGATGGACTCTCAACCACTCAGAACACCCATGGACTCCAACTCTTGAGTATCATACAAACTACCGAACTTCAGAGCTAAAAACAGTTGTTCTTGCACTGGAGGATCTGCAACTTAAAACCAAAGGCTGTCCCAACCATGCTATACATGAGAAATATAAGCAAGAGAAGTTCAATTGTGTAGCAAAACTGTCTCCAAAACCGGTGCAGTCACTGTTCCAAGTTCAAGTGTAA 1455 0.3966 MSKSKSSTLCAKDEERPLRITRSRARVLESSSKNVHIVENSKKVVVVSSENKTCVVDVPNVVPHRKRRAAFTDVTNITTKLHDKRVKHSKVQTKGVYQKKNTKLTSDVTAEVSSVQEDVKGKLTEELSTIKMVESNDTITAVTLVQEPAEHCMSNNITEHVTTDTAVSMQGSVNAGELSISPSPNKDINMTCEKVGASNFLTIVDIDKELKDSEVWSAYAPDIYSKVRVAELEKRPSTNYMEKLQQDISPSMRGILIDWLVEVTEEYKLVPDTLYLTVNLIDRFLSTKLIQKHRLQLLGITCMFIASKYEEICAPRVEEFCFITDNTYTKQEVVKMEKEVLNLLRFQLCVPTTKTFLRRFIQAAQSSYKDPRIELEFLANYLAELTLVEYSFLQFLPSLVAASAVFLARWTLNHSEHPWTPTLEYHTNYRTSELKTVVLALEDLQLKTKGCPNHAIHEKYKQEKFNCVAKLSPKPVQSLFQVQV 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00605 484 SUPERFAMILY Cyclin-like 350 473 IPR036915 -
Tsu07g00605 484 SMART cyclin_7 258 342 IPR013763 -
Tsu07g00605 484 SMART cyclin_7 355 443 IPR013763 -
Tsu07g00605 484 CDD CYCLIN 252 341 IPR013763 -
Tsu07g00605 484 Pfam Cyclin, N-terminal domain 222 349 IPR006671 -
Tsu07g00605 484 Gene3D - 222 470 - -
Tsu07g00605 484 PIRSF Cyclin_A_B_D_E 22 483 IPR039361 -
Tsu07g00605 484 Pfam Cyclin, C-terminal domain 351 473 IPR004367 -
Tsu07g00605 484 SMART Cyclin_C_2 351 474 IPR004367 -
Tsu07g00605 484 Gene3D - 236 349 - -
Tsu07g00605 484 CDD CYCLIN 350 441 IPR013763 -
Tsu07g00605 484 PANTHER CYCLIN-A2-4 46 480 - -
Tsu07g00605 484 ProSitePatterns Cyclins signature. 253 284 IPR006671 -
Tsu07g00605 484 PANTHER CYCLINS 46 480 IPR039361 -
Tsu07g00605 484 SUPERFAMILY Cyclin-like 215 349 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00605 Tsu-Chr7 4803426 4807677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00605 11 480 Core Cell Cycle Gene Families AT5G25380 49.478 3.93e-141 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00605 K06627 - gmx:547780 606.29