Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00592 ATGCAGTTCAAATCAACACAATCCTCATTTCGAGATCGTACACATGAATTCCACACCGTTGCAGAAAGATTGAAGAAatcactatcatcatcatcatcatcatcaggtCCAAATGGACCAAGCAGTAGTAATTCTCCTTAtccttcttcctcttctccttcttcttcttccagaTCCGAAGATCCTCGATCTGCCGTTGCAATTCAATCGGAATTTAATCGACGAGCTTCCAAGATTGGCTTCGGAATTCATCAAACCTCTCAGAAACTTTCCAAGCTCGCCAAATTGGCGAAAAGGACTTCGGTTTTTGATGATCCAACGATGGAAATTCAAGAATTAACAAGTGTTATTAAGCAAGATATTACTGCACTTAATTCCGCGGTTGTGGATCTTCAGTTAATCAGTAATTCAAGAAATGAGAGTGGAAATGTTTCTACCGACACAACTAGTCATTCGACTACGGTTGTCGATGATCTAAAGACTCGATTGATGAGCACTACCAAAGAGTTTAAAGATGTTCTCACAATGAGAACTGAgAACTTGAAAGTGCATGAGAATAGAAGACAATTGTTTTCGGCAAATGCTTCTAAGGATTCTGCAAATCCTTTCATCCGTCAACGTCCATTAGCTACAAAATCGGCTGCTAGTGCTTCTAATGCCCCTGCACCTCCATGGGCTAGTGGGAAGCAGGTAGATGGAGAGAGTCAACCGTTGCTGCAACAGCAACAGCAACAGCAGCAGATGGTTCCGTTGCAGGACAGTTACATGCAAAGCAGAGCTGAAGCTCTTCAAAATGTTGAGTCCACTATTCATGAGCTCAGCAACATCTTCAATCAACTAGCAACACTTGTCTCCCAGCAAGGGGAGGTTGCCATCAGGTTTTCTATTTGTCTCACTTGTGTATTGccctttattattttattccaacaCAAATTATGA 939 0.3813 MQFKSTQSSFRDRTHEFHTVAERLKKSLSSSSSSSGPNGPSSSNSPYPSSSSPSSSSRSEDPRSAVAIQSEFNRRASKIGFGIHQTSQKLSKLAKLAKRTSVFDDPTMEIQELTSVIKQDITALNSAVVDLQLISNSRNESGNVSTDTTSHSTTVVDDLKTRLMSTTKEFKDVLTMRTENLKVHENRRQLFSANASKDSANPFIRQRPLATKSAASASNAPAPPWASGKQVDGESQPLLQQQQQQQQMVPLQDSYMQSRAEALQNVESTIHELSNIFNQLATLVSQQGEVAIRFSICLTCVLPFIILFQHKL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00592 312 SUPERFAMILY t-snare proteins 70 290 IPR010989 GO:0016020|GO:0016192
Tsu07g00592 312 Gene3D - 67 293 - -
Tsu07g00592 312 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 253 290 IPR000727 -
Tsu07g00592 312 PANTHER SYNTAXIN 2 294 IPR045242 -
Tsu07g00592 312 PANTHER SYNTAXIN-32-LIKE 2 294 - -
Tsu07g00592 312 MobiDBLite consensus disorder prediction 9 23 - -
Tsu07g00592 312 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 8 26 IPR021538 -
Tsu07g00592 312 MobiDBLite consensus disorder prediction 210 251 - -
Tsu07g00592 312 MobiDBLite consensus disorder prediction 1 64 - -
Tsu07g00592 312 MobiDBLite consensus disorder prediction 24 64 - -
Tsu07g00592 312 MobiDBLite consensus disorder prediction 233 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00592 Tsu-Chr7 4708258 4710602 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00592 1 294 SNARE and Associated Proteins AT3G24350 58.896 7.65e-111 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00592 K08490 - gmx:100810956 404.06