Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00591 ATGCACGCCAAATCCACACATTCATCTTTTCGAGATCGCACCAATGAGTTCCACAGCATCACCGAAACTTTCAAGAAAACATTACCAGAATCAAATGAACCTACCACTACTTCCACCAccacttctttttcttcttcttccagaTCGGAACAACATCAATCTTCCATTGCAATTCAATCAGAGTTCAATCGAAGAGCTTCCAAAATTGGTTATGGAATTCACCAAACCTCTCAAAAGCTTTCCAAACTCGCCAAATtGGCAAAAAGGACTTCAGTTTTTGATGATCCAACTGTGGAAATTCAAGAGCTAACAAGTATTATCAAGCAAGATATTACTGCACTTAATTCCGCAGTTGTGGATCTTCAATTAGTTAGCAACTCTAGAAATGATTCTACCGACACAACTAGTCATTCCACTACGGTTGTCGATGATCTTAAGACTCGATTGATGACCACTACCAAAGAATTTAAAGATGTTCTCACCATGAGAACTGAGaATTTGAAAGAACATGAGAGTAGAAGACAATTGTTTACGTCCTCTACCTCTAAGGATTCGGCAAATCCTTTCCTACGTCAACGTCCATTAGCTACAAGGCCGGCTACTACTGGTAGCACTTCTAATGCCCCCGCACCTCCATGGGCGAGTGAGTCATCGTCTTCATCACAGTTGCTTCATAAAAAGCAAGAGGATGGGGAAAGTCAACCATTGTTAcagcaacagcagcagcagcagcagcagatAGTTCCACTGCAAGATAATTACATGCAAAGCAGAGGAGAAGCTCTTCAGAATGTCGAGTCCACTATTCACGAGCTCAGCAACATTTTTAATCAACTAGCAACACTTGTTTCTCATCAAGGAGAAATCGCCGTCAGGATTGATGAGAACATGGATGATACAGTAGCAAATGTAGAGGGGGCACAAGGGTCGTTGTTGAAGTATCTGAATAGCATATCTTCTAATAGCATAAAATCAGCACACAAAAGGAGCATGAGCGTGGTTGAGGTGGCTGCAACTGAGCCTAGGTGGTGTTTCTCCTCCGAGTTTGACCATAGCCTTTTGAGCAAGCTCCAAAAGCCAGTGGAAAGTGTGCCTTGTTCAAGAAGTCCTCCCTTAGACATCATCTCAGACATGAAATCTTCAAATCTGTTGCATTCTTCCACAATAGTTAGGACGGGTGGTGGCGGTGTTCTAGGACAAGGACAAAGAGCTTTAGGTTGA 1221 0.4046 MHAKSTHSSFRDRTNEFHSITETFKKTLPESNEPTTTSTTTSFSSSSRSEQHQSSIAIQSEFNRRASKIGYGIHQTSQKLSKLAKLAKRTSVFDDPTVEIQELTSIIKQDITALNSAVVDLQLVSNSRNDSTDTTSHSTTVVDDLKTRLMTTTKEFKDVLTMRTENLKEHESRRQLFTSSTSKDSANPFLRQRPLATRPATTGSTSNAPAPPWASESSSSSQLLHKKQEDGESQPLLQQQQQQQQQIVPLQDNYMQSRGEALQNVESTIHELSNIFNQLATLVSHQGEIAVRIDENMDDTVANVEGAQGSLLKYLNSISSNSIKSAHKRSMSVVEVAATEPRWCFSSEFDHSLLSKLQKPVESVPCSRSPPLDIISDMKSSNLLHSSTIVRTGGGGVLGQGQRALG 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00591 406 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 252 314 IPR000727 -
Tsu07g00591 406 PANTHER SYNTAXIN 2 324 IPR045242 -
Tsu07g00591 406 CDD SNARE_syntaxin5 255 316 - -
Tsu07g00591 406 PANTHER SYNTAXIN-32-LIKE 2 324 - -
Tsu07g00591 406 SMART tSNARE_6 247 314 IPR000727 -
Tsu07g00591 406 MobiDBLite consensus disorder prediction 21 56 - -
Tsu07g00591 406 SUPERFAMILY t-snare proteins 60 307 IPR010989 GO:0016020|GO:0016192
Tsu07g00591 406 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 6 26 IPR021538 -
Tsu07g00591 406 MobiDBLite consensus disorder prediction 167 247 - -
Tsu07g00591 406 Gene3D - 57 307 - -
Tsu07g00591 406 MobiDBLite consensus disorder prediction 197 222 - -
Tsu07g00591 406 MobiDBLite consensus disorder prediction 233 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00591 Tsu-Chr7 4701321 4706759 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00591 1 321 SNARE and Associated Proteins AT3G24350 58.382 5.18e-118 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00591 K08490 - gmx:100811494 408.683