Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00566 ATGGCTGAACAAATCCCATACGGTGTTGCTACAAGCCTGATTAACAGgCTGGCTTCTGCAGCCTTTCGTGAATTTGGACGGATTTATGGTGTTATGGATGAGTTGGAAAGGCTTAAGTATACCGTTGAATCCGTCAGAGCTGTGCTCCTTGATGCCGaggagaaacaacaacaaaatcatgcCGTGCAAAACTGGATAAGAAGGCTCAAAGATGATGTGCTTCATCCTGCTGATGATTTGCTAGATGAATTTGTTATTGAAGATACAAGACACAAAAGAGATGAAGCTCGTCAAGTCAAAGTAACAAAGGTACTTCATTCCTTATCTCCAAACAGAATAGCTTTTCGTCGTAAAATGGCCCATGACAttgaaaaagttcaaaaaaagtttaatgATGTGGTGAAAGATATGTCTGGGTTGAATCTAAACCAAAATGTTGTGGTGGTTGATCAAATTAACAATGTCAGGAGGGAAACTTGTTCTTATGTGTTAGAATCAGATATCATTGGAAGAGAAGATGATAAAAAGAAGATTATAAGCTTGTTGAGACAACCACATGAAATTCAGAATGTCTCTTTGGTTGGTATGGTTGGAATTGGTGGTATAGGAAAGACAACTCTTGCTCAATTGGTATACAATGATGGGGAAGTGAAAGACTTGTTTGAAAACAGGATGTGGGTATGTGTCTCTGATAACTTTGAACTCAAGCCTATTATGAAGAAAATGTTAGAGTCATTAACCAAGAACAAAATTGATGACACAATTTCATTGGACAACTTGCAATATATGTTTCGTGACAATTTAACTGGTAAGAGATACTTGTTAGTTCTTGATGACATTTGGAATGAGAGTTTTGAAAAATGGGCTCATTTGAGGACTTTCTTGATGTGTGGGGCTCACGGCAGTAAGATTTTAGTGACAACTCGTAGTAAAATTGTGGCACAAACAATGGGTATAACTGACCCCTATGTTTTGAATGTTTTGTCGCCGGATGAATCTTGGGGTTTGTTAAAGAAGATTACATTTGGGGATGGTACCATTGGAGTGAAACAAACTCTTGAATCAATTGGTAAGAAGATAGCGGAAAAGTGTAGAGGAGTTGCATTGGCAATTAGATCATTGGGAGGCATATTACAAAGAAAAAGTGAAGAAAGGGAATGGATTGATGTCCTACGAGGCGACTTTTGGAAATTATGTGAGGATAAAGACAGTATCTTGCCGGTCCTCAAATTGAGTTACCAAAACTTGTTGCCTCAGCAGAGACAATGTTTTGCATATTGCTCTTTATATCCTAAGGATTGTGAAATTATAAAGGACGAGTTAATTCAAATGTGGATGGCACAAGGTTATCTAGAATGTTCAGTTGAAGAGCAATGCATGGAAGAGGTTGGTGAACAATTCgtgaatatttttttgatgaaGTCATTCTTCCaagatgcaaaattgaataaaGATGGTGATATAGATCGTTTTAAAATGCATGATTTAATGCACGATCTTGCAACACAAGTAGCTGGAAATGATTGTTGTTACTTGGATAGTAAGGCAAAAATATGTATAGGAAGACCTGTGCATGTATCGGTGAAATTTGATGCCCTTTGTCTGTTGAAATTGTTGGATGCAAGTAGGCTGCGAACATTGATTATGTTGTCCTCCAATGGCAATGCATTATTGGATAGAGAGGAATTGGCAGTTATTTCAACATTCAAATACTTGCGAGTGTTGAAGCTAAGGTATGCTTATTTGAGCAAGCTACATGGTTCCATTGACAAATTGAAGCATTTAAGATATCTTAACTTGTTGGAGTGCAGAGGACTGGAAAGTATTTCCAAATCTATAGGTAATCTTGTTTGTTTACAAACAATAGAAGTTACAATTGGAATATTGGATGGAAAATTTGCACTTCCTACAAAACTTGTctcaaaattaatcaatttgaGACACCTTGTGCTTGATAATTTGACCTTTAGAGACACGACACCAACTgggtttcaaaatttgaacataCAACAACACGAGGGTGTAATATTTTCCAAATGGCTTTCTCCACTCacaaatattattgaaatatcTCTTAATGGTTGCCGAGGTTTACAATATCTCCCGCCGTTGGAACGCCTTCCGTTTCTTAAGTCGCTTGAGATAATTTCCCTTTACAATTTGGAGTACATATATTACGAAGAGCCTATTGTTCATGAATCATTCTTCTCATCTTTGGAAAGCCTAAAATTTATGAGTTGTTATATTCTGAGGGGATGGAGGAAGATGGGAGATGATTTCAATGATATTAACTCTTCACATAATCTCTTATTGCCTCAGTTTCCTCGTCTATCTATATTGGAAATTGGTGGGTGCTGGATGTTGACCTGCATGCCTATTTTTCCAAACATTGAGAAGAGATTATCATTGACAGAGTGCAATGTGCAGGTATTGGAAGCAACACTAAATATAGCAATGTCACAATATTCGATTGGCTTTCGTCCTCTTTCCATGCTCAAATCCATGGAAATTGGTGAAGTCAGTTCGGATGTGAAAAAATTCCCAAAGGATTGGTTGCAAAATCTCACTTCGCTTGAGAATCttgatttttactttctttcaaGTGAACAATTTCAAGTAATTGAAATATGGTTTGAAGATGAACTCAATTGTCTTCCTTCTCTTCAAAGAATCACCTTTAAAAGATGTTCTCACCTAAATACATTGCCGGATTGGATATGCAACCTCTCATCACTTCAGCATATCAAAATGATCAATTGCGGAAATTTGGAATTGTTGCCTGAAGGAATGCCTCGTCTTACCAACTTATGTACCTTTGAAATCATCGGATGTCCATTCTTAGGCGAAGAATGCAAGTTAAAAGTTTGTTGTCCATCAGTTAAACCTTGA 2889 0.3558 MAEQIPYGVATSLINRLASAAFREFGRIYGVMDELERLKYTVESVRAVLLDAEEKQQQNHAVQNWIRRLKDDVLHPADDLLDEFVIEDTRHKRDEARQVKVTKVLHSLSPNRIAFRRKMAHDIEKVQKKFNDVVKDMSGLNLNQNVVVVDQINNVRRETCSYVLESDIIGREDDKKKIISLLRQPHEIQNVSLVGMVGIGGIGKTTLAQLVYNDGEVKDLFENRMWVCVSDNFELKPIMKKMLESLTKNKIDDTISLDNLQYMFRDNLTGKRYLLVLDDIWNESFEKWAHLRTFLMCGAHGSKILVTTRSKIVAQTMGITDPYVLNVLSPDESWGLLKKITFGDGTIGVKQTLESIGKKIAEKCRGVALAIRSLGGILQRKSEEREWIDVLRGDFWKLCEDKDSILPVLKLSYQNLLPQQRQCFAYCSLYPKDCEIIKDELIQMWMAQGYLECSVEEQCMEEVGEQFVNIFLMKSFFQDAKLNKDGDIDRFKMHDLMHDLATQVAGNDCCYLDSKAKICIGRPVHVSVKFDALCLLKLLDASRLRTLIMLSSNGNALLDREELAVISTFKYLRVLKLRYAYLSKLHGSIDKLKHLRYLNLLECRGLESISKSIGNLVCLQTIEVTIGILDGKFALPTKLVSKLINLRHLVLDNLTFRDTTPTGFQNLNIQQHEGVIFSKWLSPLTNIIEISLNGCRGLQYLPPLERLPFLKSLEIISLYNLEYIYYEEPIVHESFFSSLESLKFMSCYILRGWRKMGDDFNDINSSHNLLLPQFPRLSILEIGGCWMLTCMPIFPNIEKRLSLTECNVQVLEATLNIAMSQYSIGFRPLSMLKSMEIGEVSSDVKKFPKDWLQNLTSLENLDFYFLSSEQFQVIEIWFEDELNCLPSLQRITFKRCSHLNTLPDWICNLSSLQHIKMINCGNLELLPEGMPRLTNLCTFEIIGCPFLGEECKLKVCCPSVKP 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00566 962 Pfam NB-ARC domain 171 414 IPR002182 GO:0043531
Tsu07g00566 962 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 427 IPR027417 -
Tsu07g00566 962 SUPERFAMILY RNI-like 737 950 - -
Tsu07g00566 962 PANTHER DISEASE RESISTANCE PROTEIN RP 36 804 IPR044974 GO:0006952
Tsu07g00566 962 SUPERFAMILY L domain-like 483 812 - -
Tsu07g00566 962 Gene3D Ribonuclease Inhibitor 799 960 IPR032675 -
Tsu07g00566 962 PANTHER OS05G0414200 PROTEIN 36 804 - -
Tsu07g00566 962 Gene3D - 327 412 IPR042197 -
Tsu07g00566 962 Gene3D - 152 320 IPR027417 -
Tsu07g00566 962 CDD RX-CC_like 7 138 IPR038005 -
Tsu07g00566 962 Gene3D - 413 504 IPR036388 -
Tsu07g00566 962 Coils Coil 35 55 - -
Tsu07g00566 962 PRINTS Disease resistance protein signature 193 208 - -
Tsu07g00566 962 PRINTS Disease resistance protein signature 267 281 - -
Tsu07g00566 962 PRINTS Disease resistance protein signature 364 378 - -
Tsu07g00566 962 PRINTS Disease resistance protein signature 590 606 - -
Tsu07g00566 962 Gene3D - 10 124 - -
Tsu07g00566 962 Gene3D Ribonuclease Inhibitor 528 787 IPR032675 -
Tsu07g00566 962 Pfam Rx N-terminal domain 11 97 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00566 Tsu-Chr7 4439537 4442600 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00566 183 504 WRKY Transcription Factor Family AT5G45050 24.085 2.01e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00566 - - mtr:MTR_8g027540 1461.82