Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00542 atgGCAACTGTAGAAGATGTGAAAGAATTCAAAAAGGAGCACAAAGAACTTATTCCAGGATTACCAAACGAAATAGCAGAAATTTGTCTTCTTCATGTTCCATATCCATATCAACCTCTAGTACGCTCTGTTTCTTCTTCATGGAACAGAGCAATATCAAATCCATCTTTTCTACTCTCCAAAAAAAATCTCTCGAATCCACACCTCTTTGTATTAGCTTTCCACACAGTAACATCGAAAATTCAATGGCAATCGCTAGATCCTTCTTCTAACCGTTGGTTTATACTTCCTTTGATGCCGCTTCCAAACGACGCCGTTTGTCCAACTTCCTTTTCCGCTGCCTCGTTACCACGTCAGGGTAAGATATTCGTTATGCGAGGTAATTGTTCGGAAAGGGAGACATTCGTTTACCGTGCCGCCGTAAATAAGTGGTTGAAGTTGTCGGAAATAATCATCGGGAGAAAATCGTTCTTCGCGGCGGAGGAAGTTAACGGAAGAATCGTGACGGTTGGTGAGAGTGGAACAGATATCTACGATCCAGAAACTGACACGTGGAAGAGAGGTGCGAAATTTACTGGCGAATTAGATAGGTATGAGACGGTTGTTAACGGAGGGAAGTTGTACGTAACGGAAGGATGGTGGTGGCCGTTTGCGGTTAGACCAAGAGGTTGGGTTTACGAATTGGAGAATGACACGTGGCGTGAGATGGGAGAAGGAATGAAAGACGGTTGGTCAGGGGTGAGTGTTTCAGTGTGTGGGAGAGTGTTTATGATACCAGACGTTGATTTAGCGATGAAGGTTTATGATGAAGTGACTGACACGTGGCGGTGTGTGAGTGGTGAGAGATTACCTAGAGAAGGAATGAAGAAACCGTTTGTTGTAAGAGGTTTAGGTGATAGAATCTATGTGGtgtcacttggtttgaaagTGGTTATTGGTAGTGTTATCGTTGATGATTGTGGTGTGAAGGTGACGTGGCAGGTTATGGAGGGAGCTGAAGCTTTTAGAGAATTTGCACCTTCTAGTTGCCAGGTGACACATCTTGTCCTCGTGCTACAATCCGTTTGCAAACAAGACAGTCTCGTTTTCGTGATAGTCAAGCTAGATTAA 1110 0.4306 MATVEDVKEFKKEHKELIPGLPNEIAEICLLHVPYPYQPLVRSVSSSWNRAISNPSFLLSKKNLSNPHLFVLAFHTVTSKIQWQSLDPSSNRWFILPLMPLPNDAVCPTSFSAASLPRQGKIFVMRGNCSERETFVYRAAVNKWLKLSEIIIGRKSFFAAEEVNGRIVTVGESGTDIYDPETDTWKRGAKFTGELDRYETVVNGGKLYVTEGWWWPFAVRPRGWVYELENDTWREMGEGMKDGWSGVSVSVCGRVFMIPDVDLAMKVYDEVTDTWRCVSGERLPREGMKKPFVVRGLGDRIYVVSLGLKVVIGSVIVDDCGVKVTWQVMEGAEAFREFAPSSCQVTHLVLVLQSVCKQDSLVFVIVKLD 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00542 369 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 4 345 - -
Tsu07g00542 369 PANTHER F-BOX PROTEIN AFR 4 345 - -
Tsu07g00542 369 Gene3D - 59 324 IPR015915 GO:0005515
Tsu07g00542 369 SUPERFAMILY Kelch motif 67 304 IPR015915 GO:0005515
Tsu07g00542 369 SMART fbox_2 21 61 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00542 - - mtr:MTR_3g108860 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00542 07 4226569 4228660 Tsu07g00542 07 4226569 4228660 ECH
Tsu08g00756 08 8010985 8014707 Tsu07g00542 07 4226569 4228660 ECH