Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00528 ATGTGGTTGCCAAAGAATTCAGATAAGAAGGATGGTGTAAATGGATTAATAGCAGTGGCAATAGACAAAGAAAAGGGGAGCCAAAATGCACTCAAATGGACTATTGACAATCTCCTCTCAAGAAGTGCAACTGTAATTCTCATCCATGTCAAGATTTCGGCAACTTCTCTTTCTTTATCACCTTCTATTTTCGCCCTAAGGATACATTCTAATGGTCATGACAGTTCACATCCAGAAGCtcacaaaaacattttcctcCCATATCGCGTCTTTTGTACACGCAAAGATATACAATGCAAGGATGTACTACTAGAAGATACAGATGTCTCCAGAGCATTGATTGACTATGCTTCTCAGGCAGGAATTGAGCATCTGATTCTTGGCTCTTCGGCAAAAACTAGTTTGCTCAAAAGATTCAAGGTATCAGATATTCCTGGAGCAGTGTCAAAAGGCGCACCGGATTTCTGTACTGTCTATATCATTGGCAAAGGAAAGATACAATCGATGCGATCTGCATCTCGTCCTGCTCCAGCCATTTCTCCTCTACATGTCAATCAAACTACTCTCAAACCAGACCAATCAGACACAAATGTGGTGTTGGAACAAAGTGTAAAAGAACATGAAAGGAATTCTTTTGAAGCTGGGCCACGTCATTCGTATGATGAACTAGATTTCTTCAGATCACCACTCACTAGGAAAGGTTGCAATGCAAAACAATATTTGGAAAATAAGGCAGATGGTGATATATCATTTGTAAGTAACGGAAGGCATAGTATCGACCGAATGTTGCCTCCATTGTATAATAACAACTCAGAGACAGGCCCTAGGATATCATCTAGCTCAGATCCAGAAGAAAGCAGCAGCTTTGAATCTGTCTATCAAGGAAGGAAGTCTATGGATTCCTTCCTTATTCCTGAATTTACATCCCTCTCATTCGATAGCGAAAGGCTCTCGTCTTCTACATCACAAGCCGTGGATGATATGGAGGCTGAAATGAGAAGATTAAAATTGGAGCTCAAGCAAACAATGGAAATGTACAACACAGCCTGTAAAGAAGCACTCACAGCACAACAGAAGGCAATAGAACTTCAAAAATggaaaatagaagaagaaaagagattaGAAGAAGCAAGGCTAGCCGAGGAAGCTGCATTGGCAATTgcagaaaaggagagagaaaaatcTAAAGCAGCCATTGAGGCTGCTGAAGCACAAAAGAGAATAGCAGAATTGGAAGCACAGAAGAGACTTAAAGCAGAAATGAAAGCACTTAAAGAAgcagaagaaaaaagaaaagtaatggATGCGTTGGTAAATGTAGATGTCAGGTATAGAAAGTATACAATTGAGGAGATTGAAGCTGCAAcagaatttttttcaaagtcTCTCAAGATTGGAGAAGGAGGATATGGTCCAGTTTTTAAGTGTCTTCTGGACCATACACCTGTTGCAGTTAAGGTTCTTCGTCCTGATGCAGCACAAGGGCGGTCACAGTTTCAAAGAGAGGTTGAGGTACTGAGCTGCATACGGCATCCAAACATGGTTCTCCTCTTAGGAGCCTGTCCTGAATACGGATGCCTAGTGTACGAGTACATGTCAAATGGAAGCTTAGACGATTGCCTATTTTGTCGAGGAAACAGTCCTCCACTTTCTTGGCAGTTAAGATTCAAAATTGCAGCCGAAATCGGCACTGGCTTGTTGTTCCTTCACCAAGCAAAACCAGAACCTATAGTACACAGAGACTTAAAACCAGGAAACATCTTACTAGACAGAAACTACGTAGCCAAAATCAGTGATGTAGGTTTGGCAAGACTAGTTCCACCGTCAGTAGCCGACTGTGTGACACAATACCGAATGACAGAAACAGCAGGAACTTTCTGTTATATCGATCCCGAGTATCAACAAACAGGAATGTTAGGTGTGAAATCAGATATATATTCTCTTGGGATCATTTACCTTCAAATTTTGACAGCAAAACCACCAACGGGTTTGGCACATAATGCTCAACAAGCTATTGAGAAAGGAACTTTTACTGAGATGCTGGATCCTTCAGTGACTGATTGGCCAATGGAGGATGTTTTGAGTTTAGCAAAGATCGCGGTTCAGTGTGCCGAGTTAAGGCGGAAAGATAGACCTGATCTTGGTAATGTTGTACTACCAGAACTTGACAGATTGAAAGAACTTGCTGAAAAAAGTGACCAAGATTCAACAAATGGTAGTAGTAGCCCTATAAATATGTCCCATAAGGAGCTTATGGCATGTTGA 2265 0.3951 MWLPKNSDKKDGVNGLIAVAIDKEKGSQNALKWTIDNLLSRSATVILIHVKISATSLSLSPSIFALRIHSNGHDSSHPEAHKNIFLPYRVFCTRKDIQCKDVLLEDTDVSRALIDYASQAGIEHLILGSSAKTSLLKRFKVSDIPGAVSKGAPDFCTVYIIGKGKIQSMRSASRPAPAISPLHVNQTTLKPDQSDTNVVLEQSVKEHERNSFEAGPRHSYDELDFFRSPLTRKGCNAKQYLENKADGDISFVSNGRHSIDRMLPPLYNNNSETGPRISSSSDPEESSSFESVYQGRKSMDSFLIPEFTSLSFDSERLSSSTSQAVDDMEAEMRRLKLELKQTMEMYNTACKEALTAQQKAIELQKWKIEEEKRLEEARLAEEAALAIAEKEREKSKAAIEAAEAQKRIAELEAQKRLKAEMKALKEAEEKRKVMDALVNVDVRYRKYTIEEIEAATEFFSKSLKIGEGGYGPVFKCLLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEYMSNGSLDDCLFCRGNSPPLSWQLRFKIAAEIGTGLLFLHQAKPEPIVHRDLKPGNILLDRNYVAKISDVGLARLVPPSVADCVTQYRMTETAGTFCYIDPEYQQTGMLGVKSDIYSLGIIYLQILTAKPPTGLAHNAQQAIEKGTFTEMLDPSVTDWPMEDVLSLAKIAVQCAELRRKDRPDLGNVVLPELDRLKELAEKSDQDSTNGSSSPINMSHKELMAC 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00528 754 Gene3D Phosphorylase Kinase; domain 1 438 531 - -
Tsu07g00528 754 PANTHER UNIVERSAL STRESS FAMILY PROTEIN 8 750 - -
Tsu07g00528 754 ProSitePatterns Serine/Threonine protein kinases active-site signature. 577 589 IPR008271 GO:0004672|GO:0006468
Tsu07g00528 754 SMART serkin_6 459 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00528 754 ProSiteProfiles Protein kinase domain profile. 459 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00528 754 Pfam Universal stress protein family 17 139 IPR006016 -
Tsu07g00528 754 SUPERFAMILY Protein kinase-like (PK-like) 442 718 IPR011009 -
Tsu07g00528 754 CDD STK_N 16 164 - -
Tsu07g00528 754 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 17 139 - -
Tsu07g00528 754 MobiDBLite consensus disorder prediction 729 754 - -
Tsu07g00528 754 Pfam Protein kinase domain 461 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00528 754 Coils Coil 318 345 - -
Tsu07g00528 754 MobiDBLite consensus disorder prediction 264 291 - -
Tsu07g00528 754 Coils Coil 371 437 - -
Tsu07g00528 754 Gene3D HUPs 16 161 IPR014729 -
Tsu07g00528 754 Gene3D Transferase(Phosphotransferase) domain 1 532 748 - -
Tsu07g00528 754 PANTHER OS02G0152300 PROTEIN 8 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00528 Tsu-Chr7 4131082 4134602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00528 1 732 Receptor kinase-like Gene Family AT1G78940 57.086 0.0 784
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Tsu07g00528 Pkinase 6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00528 - - gmx:100803461 1043.11