Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00523 ATGGAGCTCAAAAATGAGAAACTAGCCAGATTCTCCTATGATGGAAAGCTTAATCTTGAGAAGCCAATGCAAGTTTACAAGATTCCGAAAGTTGTTGTTCCGGATGGCAAAATAAGTATTGGTGATACTGATAATGATAAGAATAGAATGAATGTTAAATTTACAAGAAATCATGAACAATGGAAGAAGAGAATTCTTGATCCAGGAAGTGATATCTTTCTGGAATGGAAAAGGGCTTTCTTATTCACTTCCATACTATCACTTTTTGTTGATCCATTGTTTTTCTACCTTCCCTCAGTAGCAATAGCAACTGATAAGAGTTCATCATGCATGGTTACTGATTTGAATTTAGGAATTGTTGTCACATGTTTTCGGACATTTGCCGATGTTTTCTATTTGATAAACATGATCATAAAGTTTAGGACAGCCTTTGTGTCACCAAGTTCAAGGGTTTTTGGGAGAGGTGAACTTGTCATGGATCCAAAGTTGATTGCGAGGCGGTATTTGAGATCTGAGTTTTTCTTAGATCTTTTTGCTGCACTGCCTCTTCCTCAGATCGTGATTTGGTTTATAATGCCAGCGATTAGAAGCTCCCATGCTGATCATACCAACAATGCTCTTGTACTGATTGTTCTGATTCAATATGTCCCTAGATTGTATATGATTTTCCCATTAAGTTCTCAGATTGTTAAAGCTACCGGTGTTGTCACAAAGACAGCTTGGGCAGGAGCTGCGTACAATCTTTTACTTTACTTGTTAGCTAGTCATGTGTTGGGGGCATCATGGTATTTGTTATCAATTGAAAGGCATGCTACTTGCTGGAAATCTGAATGCAGAAATGAAAACTTACCTGTGAAATGTGTTCTTAACTACTTGGATTGCAGTACTATAAACGATGATGATCGCACGGAGTGGGCGAATACTACTTCTGTGTTTGGTAACTGCAATCCTGAAAGTAGCACAAGTTTCAAGTATGGAATTTTTGGAATTGCAGTGGAAAATAATGTTGTCTCTTCTGTGTTTATAGAGAAGTACCTCTATTGTTTGTGGTGGGGATTGCAGAATTTGAGTTCCTATGGTCAGGGTTTGATTACAAGTACATTTGTTTGGGAAACTGCATTTGCGATACTTATATCTATCGTAGGTCTAGTTTTGTTTGCTCACTTAATCGGTAACATGCAGACTTATTTGCAATCTATTACGGTGAGACTTGAAGAGTGGAGGCTCAAGCGACGTGACACAGAAGAGTGGATGAAACATCGCCAACTCCCACAATTTCTTAGAGAACGTGTCCGGAGATTTGTTCAGTACAAATGGCTTGCAACTCGAGGTGTTGATGAAGAAACAATCCTAAGAGGCCTCCCTACGGACCTTCGTAGAGATATCCAACGCCATCTTTGCTTAGACCTTGTTCGACGTGTTCCGTTTTTCTCACAAATGGATGATCAATTACTTGACGCAATATGTGAGCGGTTGGTATCATCCTTGAGCACTCAAGGAACATACATTGTCAGAGAAGGAGATCCAGTTACCGAGATGCTTTTTATCATCAGAGGGAGGCTTGAAAGTTCAACCACAAATGGTGGAAGAACTGGTTTCTTTAACTCTATAACCTTGAGGCCTGGTGATTTCTGTGGAGAAGAGTTACTTGCTTGGGCATTGCTTCCAAAATCCACTCTCAACTTGCCTTCTTCTACAAGAACAGTTAAAGCACTTGTTGAAGTTGAAGCTTTTGAACTTAGAGCAGAAGATCTTAAATTTGTTGCGAATCAGTTTAGACGTCTCCACAGCAAAAAGTTACAGCATACGTTCCGTTTCTACTCTTACCATTGGAGGACATGGGCTGCTTGTTTCATCCAGGCTGCTTGGCGCCGGTTCAAAAAGAGAGTATTGGCTAATAGCCTTAGCTTGAGGGAATACAAGTCCTTCATTAATGAACAAGTAAGATATCAAATGGAACGTGAGGAAGAAGAGCGCGGTTCTGTGACTTCAAACACTGCACAAGTAAAACAGAATCTCGGTGTCACTATACTGGCTTCAAGATTTGCAGCAAACACAAGGAAAGGtgttcagaagatcaaagatgTAGAGATGCTCAAGTTGCAAAAACCTGAAGAGCCAGATTTCTCAGTAGAGCCTGAAGATGATTAA 2151 0.3966 MELKNEKLARFSYDGKLNLEKPMQVYKIPKVVVPDGKISIGDTDNDKNRMNVKFTRNHEQWKKRILDPGSDIFLEWKRAFLFTSILSLFVDPLFFYLPSVAIATDKSSSCMVTDLNLGIVVTCFRTFADVFYLINMIIKFRTAFVSPSSRVFGRGELVMDPKLIARRYLRSEFFLDLFAALPLPQIVIWFIMPAIRSSHADHTNNALVLIVLIQYVPRLYMIFPLSSQIVKATGVVTKTAWAGAAYNLLLYLLASHVLGASWYLLSIERHATCWKSECRNENLPVKCVLNYLDCSTINDDDRTEWANTTSVFGNCNPESSTSFKYGIFGIAVENNVVSSVFIEKYLYCLWWGLQNLSSYGQGLITSTFVWETAFAILISIVGLVLFAHLIGNMQTYLQSITVRLEEWRLKRRDTEEWMKHRQLPQFLRERVRRFVQYKWLATRGVDEETILRGLPTDLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLSTQGTYIVREGDPVTEMLFIIRGRLESSTTNGGRTGFFNSITLRPGDFCGEELLAWALLPKSTLNLPSSTRTVKALVEVEAFELRAEDLKFVANQFRRLHSKKLQHTFRFYSYHWRTWAACFIQAAWRRFKKRVLANSLSLREYKSFINEQVRYQMEREEEERGSVTSNTAQVKQNLGVTILASRFAANTRKGVQKIKDVEMLKLQKPEEPDFSVEPEDD 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00523 716 SUPERFAMILY Voltage-gated potassium channels 69 398 - -
Tsu07g00523 716 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 46 712 - -
Tsu07g00523 716 CDD CAP_ED 476 607 IPR000595 -
Tsu07g00523 716 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 46 712 - -
Tsu07g00523 716 ProSiteProfiles cAMP/cGMP binding motif profile. 476 559 IPR000595 -
Tsu07g00523 716 Pfam Cyclic nucleotide-binding domain 499 587 IPR000595 -
Tsu07g00523 716 Gene3D - 93 402 - -
Tsu07g00523 716 Gene3D Helix hairpin bin 404 467 - -
Tsu07g00523 716 Gene3D Jelly Rolls 474 594 IPR014710 -
Tsu07g00523 716 PRINTS EAG/ELK/ERG potassium channel family signature 136 145 IPR003938 GO:0005249|GO:0006813|GO:0016020
Tsu07g00523 716 PRINTS EAG/ELK/ERG potassium channel family signature 345 362 IPR003938 GO:0005249|GO:0006813|GO:0016020
Tsu07g00523 716 PRINTS EAG/ELK/ERG potassium channel family signature 371 382 IPR003938 GO:0005249|GO:0006813|GO:0016020
Tsu07g00523 716 PRINTS EAG/ELK/ERG potassium channel family signature 389 398 IPR003938 GO:0005249|GO:0006813|GO:0016020
Tsu07g00523 716 PRINTS EAG/ELK/ERG potassium channel family signature 439 446 IPR003938 GO:0005249|GO:0006813|GO:0016020
Tsu07g00523 716 SUPERFAMILY cAMP-binding domain-like 406 598 IPR018490 -
Tsu07g00523 716 SMART cnmp_10 476 607 IPR000595 -
Tsu07g00523 716 Pfam Ion transport protein 76 403 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00523 Tsu-Chr7 4085047 4088363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00523 54 712 Ion Channels AT2G24610 71.814 0.0 993
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00523 K05391 - gmx:100803334 1200.65