Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00513 ATGGTGGAGAAAGGTGCCGCAGGTAGAAAAGAGGAAGTTGTTACTCGTGAGTACACTATCAACCTCCACACGAGTCTTCATGGCTGCACCTTCAAAAAGAAGGCACCAAAAGCTATCAAGGAAATAAGAAAATTTGTTCCCAAACTATACTCAGGAGGATCAGAgtccTTTGTATCTGATTTGGCTTTTTCCATGTCGGTATTGACTATTTTGGTGGCGGACTACGAGCCGGACTTGTCTACTTGGGTTTCTTGCTACCATTGA 264 0.428 MVEKGAAGRKEEVVTREYTINLHTSLHGCTFKKKAPKAIKEIRKFVPKLYSGGSESFVSDLAFSMSVLTILVADYEPDLSTWVSCYH 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00513 87 PANTHER - 3 49 - -
Tsu07g00513 87 Gene3D - 2 65 IPR023621 -
Tsu07g00513 87 SMART Ribosomal_L31e_2 11 68 IPR000054 GO:0003735|GO:0005840|GO:0006412
Tsu07g00513 87 Pfam Ribosomal protein L31e 12 48 IPR000054 GO:0003735|GO:0005840|GO:0006412
Tsu07g00513 87 SUPERFAMILY Ribosomal protein L31e 12 52 IPR023621 -
Tsu07g00513 87 PANTHER 60S RIBOSOMAL PROTEIN L31 3 49 IPR000054 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00513 Tsu-Chr7 4041609 4042507 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00513 8 83 Cytoplasmic Ribosomal Protein Gene Family AT5G56710 56.579 2.88e-21 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00513 K02910 - twl:119997954 89.3521