Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu07g00508 | ATGGGTATTGCAAAACTATTTTTTGGCCTAAGGACGTGTCAACCACGTTACATAAAAGATGCagctattttgtttgataaagagttgcGTGGTGCGAATGAAGACATTGTGGTTGGGGGAGGTCATTTCTTTGAGGATTTTCAATGGAGGATAGCTTTCTTACCTATTAAGGCTGGGGGATTGGGGTTGCACTCAGCAGTAGAGACAAGTTCGTATGCTTTTGTGGCTTTTAGAGTTCGGTCTTGGGTGTTGCAAGAACATATATTGAGGGATAGTGGAGTATGTGGCATGGACTCTGATTTTTACAATGCTTTGGATGGTCTCCGTGATATGATTccaacttttgactttagcagTTTCACTAGCAAGGACACTGTCCCTCCTAAAGCCCAACATATTTTGGCGAGTGCcatgtttagtaaaattgtaaAGGACATGGAAGTTAACTTTCAATTGACTATCAGACAAAAAGCAGTTTTTGGATGCTTACAGGCAGCccatgctcaagattttctgcTAGTTATCCCAATTGACGGATTAGGCCAACATATGTCCCCGGTAGAGTATCGCACAATCCTCAAATATCACTTGATGATTCCTTTATTTCCTGCTGATGAGCTCTCCTCTTTACACAACCGCATTGGTCATGCCCGCTTTCGTCGTGCTCCGGTGGTTCCATTACCTCAACTGCCACACACTTCCTTTGCCTCCACCACTACGTCGCTACCACCACAAACTTTCTCTACCTCCACCAATACGTCGCTACCACCACCTCTACTACATATTCAACCTCAACCTCCTCAGCACCAATCTTTAACGCTTGATTTCACAAAACCTAATATCTTAATATCTAACTCAGAATCCTTATCGTTAGATCTTGATATTCCCAAAGAAACGTTTAGTGTTTCATCTAACTCATCATTCATGTCATCCGCCATCACCGGTGACATCATTGGTGACGGTAGTGTTTCCAATGGCATACAAAGTTCATCTCTCTTCCTCACACCGGCTATCTTCGGTGGTAAACCGCCTCTTTCATCGTCATCGTCATTGAAGAATAAGTGTCACAGCCACTCTGACAGCGGAAAACGCTCTGGCTCTAACAAATGTCACTGCACGAAAGAAAGgaaaaataGGATGAAAAGAACGGTGAGAGTAGCGGCGATAAGTGATAAGATCGCCGATATCCCATCGGATGAGTATAAATGGAGGAAGTAtggacaaaaattgataaagggATCAGTGTATCCAAGAGGATATTATAAGTGTTCTACGGTGAAAGGGTGTCCAGCTAGAAAAAAGGTGGAGAGAGCAAAAGATGATCCTAACATGATGATCGTAACTTACCTGGAGGGACATTGTCATGAAAttcatattgaaaatatttCTAGAAGTGGACCTATGGATTTGGTGGTATTTGAGGGTCAACAttaa | 1434 | 0.3961 | MGIAKLFFGLRTCQPRYIKDAAILFDKELRGANEDIVVGGGHFFEDFQWRIAFLPIKAGGLGLHSAVETSSYAFVAFRVRSWVLQEHILRDSGVCGMDSDFYNALDGLRDMIPTFDFSSFTSKDTVPPKAQHILASAMFSKIVKDMEVNFQLTIRQKAVFGCLQAAHAQDFLLVIPIDGLGQHMSPVEYRTILKYHLMIPLFPADELSSLHNRIGHARFRRAPVVPLPQLPHTSFASTTTSLPPQTFSTSTNTSLPPPLLHIQPQPPQHQSLTLDFTKPNILISNSESLSLDLDIPKETFSVSSNSSFMSSAITGDIIGDGSVSNGIQSSSLFLTPAIFGGKPPLSSSSSLKNKCHSHSDSGKRSGSNKCHCTKERKNRMKRTVRVAAISDKIADIPSDEYKWRKYGQKLIKGSVYPRGYYKCSTVKGCPARKKVERAKDDPNMMIVTYLEGHCHEIHIENISRSGPMDLVVFEGQH | 477 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu07g00508 | 477 | Pfam | WRKY DNA -binding domain | 399 | 455 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tsu07g00508 | 477 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 207 | 461 | IPR044810 | GO:0003700 | |
Tsu07g00508 | 477 | ProSiteProfiles | WRKY domain profile. | 392 | 458 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tsu07g00508 | 477 | Pfam | Plant zinc cluster domain | 352 | 395 | IPR018872 | - | |
Tsu07g00508 | 477 | MobiDBLite | consensus disorder prediction | 356 | 373 | - | - | |
Tsu07g00508 | 477 | SMART | WRKY_cls | 397 | 457 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Tsu07g00508 | 477 | Gene3D | WRKY domain | 376 | 450 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Tsu07g00508 | 477 | PANTHER | WRKY PROTEIN | 207 | 461 | - | - | |
Tsu07g00508 | 477 | MobiDBLite | consensus disorder prediction | 344 | 376 | - | - | |
Tsu07g00508 | 477 | SUPERFAMILY | WRKY DNA-binding domain | 395 | 457 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu07g00508 | Tsu-Chr7 | 4006253 | 4010055 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu07g00508 | 209 | 455 | WRKY Transcription Factor Family | AT2G24570 | 55.426 | 7.47e-62 | 202 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Tsu07g00508 | WRKY | 1.3e-22 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu07g00508 | - | - | han:110942984 | 268.855 |