Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00508 ATGGGTATTGCAAAACTATTTTTTGGCCTAAGGACGTGTCAACCACGTTACATAAAAGATGCagctattttgtttgataaagagttgcGTGGTGCGAATGAAGACATTGTGGTTGGGGGAGGTCATTTCTTTGAGGATTTTCAATGGAGGATAGCTTTCTTACCTATTAAGGCTGGGGGATTGGGGTTGCACTCAGCAGTAGAGACAAGTTCGTATGCTTTTGTGGCTTTTAGAGTTCGGTCTTGGGTGTTGCAAGAACATATATTGAGGGATAGTGGAGTATGTGGCATGGACTCTGATTTTTACAATGCTTTGGATGGTCTCCGTGATATGATTccaacttttgactttagcagTTTCACTAGCAAGGACACTGTCCCTCCTAAAGCCCAACATATTTTGGCGAGTGCcatgtttagtaaaattgtaaAGGACATGGAAGTTAACTTTCAATTGACTATCAGACAAAAAGCAGTTTTTGGATGCTTACAGGCAGCccatgctcaagattttctgcTAGTTATCCCAATTGACGGATTAGGCCAACATATGTCCCCGGTAGAGTATCGCACAATCCTCAAATATCACTTGATGATTCCTTTATTTCCTGCTGATGAGCTCTCCTCTTTACACAACCGCATTGGTCATGCCCGCTTTCGTCGTGCTCCGGTGGTTCCATTACCTCAACTGCCACACACTTCCTTTGCCTCCACCACTACGTCGCTACCACCACAAACTTTCTCTACCTCCACCAATACGTCGCTACCACCACCTCTACTACATATTCAACCTCAACCTCCTCAGCACCAATCTTTAACGCTTGATTTCACAAAACCTAATATCTTAATATCTAACTCAGAATCCTTATCGTTAGATCTTGATATTCCCAAAGAAACGTTTAGTGTTTCATCTAACTCATCATTCATGTCATCCGCCATCACCGGTGACATCATTGGTGACGGTAGTGTTTCCAATGGCATACAAAGTTCATCTCTCTTCCTCACACCGGCTATCTTCGGTGGTAAACCGCCTCTTTCATCGTCATCGTCATTGAAGAATAAGTGTCACAGCCACTCTGACAGCGGAAAACGCTCTGGCTCTAACAAATGTCACTGCACGAAAGAAAGgaaaaataGGATGAAAAGAACGGTGAGAGTAGCGGCGATAAGTGATAAGATCGCCGATATCCCATCGGATGAGTATAAATGGAGGAAGTAtggacaaaaattgataaagggATCAGTGTATCCAAGAGGATATTATAAGTGTTCTACGGTGAAAGGGTGTCCAGCTAGAAAAAAGGTGGAGAGAGCAAAAGATGATCCTAACATGATGATCGTAACTTACCTGGAGGGACATTGTCATGAAAttcatattgaaaatatttCTAGAAGTGGACCTATGGATTTGGTGGTATTTGAGGGTCAACAttaa 1434 0.3961 MGIAKLFFGLRTCQPRYIKDAAILFDKELRGANEDIVVGGGHFFEDFQWRIAFLPIKAGGLGLHSAVETSSYAFVAFRVRSWVLQEHILRDSGVCGMDSDFYNALDGLRDMIPTFDFSSFTSKDTVPPKAQHILASAMFSKIVKDMEVNFQLTIRQKAVFGCLQAAHAQDFLLVIPIDGLGQHMSPVEYRTILKYHLMIPLFPADELSSLHNRIGHARFRRAPVVPLPQLPHTSFASTTTSLPPQTFSTSTNTSLPPPLLHIQPQPPQHQSLTLDFTKPNILISNSESLSLDLDIPKETFSVSSNSSFMSSAITGDIIGDGSVSNGIQSSSLFLTPAIFGGKPPLSSSSSLKNKCHSHSDSGKRSGSNKCHCTKERKNRMKRTVRVAAISDKIADIPSDEYKWRKYGQKLIKGSVYPRGYYKCSTVKGCPARKKVERAKDDPNMMIVTYLEGHCHEIHIENISRSGPMDLVVFEGQH 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00508 477 Pfam WRKY DNA -binding domain 399 455 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g00508 477 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 207 461 IPR044810 GO:0003700
Tsu07g00508 477 ProSiteProfiles WRKY domain profile. 392 458 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g00508 477 Pfam Plant zinc cluster domain 352 395 IPR018872 -
Tsu07g00508 477 MobiDBLite consensus disorder prediction 356 373 - -
Tsu07g00508 477 SMART WRKY_cls 397 457 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g00508 477 Gene3D WRKY domain 376 450 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu07g00508 477 PANTHER WRKY PROTEIN 207 461 - -
Tsu07g00508 477 MobiDBLite consensus disorder prediction 344 376 - -
Tsu07g00508 477 SUPERFAMILY WRKY DNA-binding domain 395 457 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00508 Tsu-Chr7 4006253 4010055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00508 209 455 WRKY Transcription Factor Family AT2G24570 55.426 7.47e-62 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu07g00508 WRKY 1.3e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00508 - - han:110942984 268.855