Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00497 ATGGCATCAACTGAATCAGATCTAGATGAGTTTCTCAATCTCGATTACCAACTTCGTTATGCCGATACTGAAGCATTCATGACTGGCGTTTGCTCCGCCGCTTTTCAAACTCTGTTACCGGATACAGTGACTTCATTTTCAACTTGTGGTGGACTAACAGACTCCCAAAACTTTACTCCCAAACATTCCACCATCACTGCTACTGTTGATTCTCAATCATCAATTTATGGCACTGTTGGAAGCCCAGTTTCAGCTAATAAACCAAACAGCAGAGAGAATCATACTAAAGGGAATACAAGTGATTCCTCTGATCCTTCAAATGAGGATGATGAATTAGGTCCTTCTGAACAAAGCACAAATCCACTTGATATCAAACGCCTTAGAAGGAAGGTTTCTAATTGCTTGTCAGCCAGGAGGTCAAGGCAACGAAAACATGCGCATTTGTCTGAACTTGAGTCTAAGGTTGAAAAGCTGAAACTGGAAAATGCAACCCTATACAAGCAGTTTACAGATACTAGTCAACAATTTCATGAAGCCGATACAAATAATCGAGTGCTAAAATCAGATGTAGAAGCTTTGAGAGCTAAGGTGAAGTTAGCTGAAGATATGGTCACTAGGAGCTCTTTCACCACATCCATAAACAATCAATTTCTTCACAATCAATATCAATTGAGCACACCACCACAACTCAGCGCGACTAATATTCGTCGCATGCCACATGTCTCGCCAACCATCAATGTTCAGCAGGGAAATGGTGCCTCATACGGTGGAGTTGCAGTTGGTGAACACAATTCAAATCTTGTTGGGTTTGGAAACTTGGACATGAGTAATTTCGACGTCATCGACAATGGAGTCCTAAACAATGCTTTGAGCTGCGTAACTATTTGGCCTTAA 894 0.4139 MASTESDLDEFLNLDYQLRYADTEAFMTGVCSAAFQTLLPDTVTSFSTCGGLTDSQNFTPKHSTITATVDSQSSIYGTVGSPVSANKPNSRENHTKGNTSDSSDPSNEDDELGPSEQSTNPLDIKRLRRKVSNCLSARRSRQRKHAHLSELESKVEKLKLENATLYKQFTDTSQQFHEADTNNRVLKSDVEALRAKVKLAEDMVTRSSFTTSINNQFLHNQYQLSTPPQLSATNIRRMPHVSPTINVQQGNGASYGGVAVGEHNSNLVGFGNLDMSNFDVIDNGVLNNALSCVTIWP 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00497 297 Coils Coil 141 168 - -
Tsu07g00497 297 SUPERFAMILY Leucine zipper domain 124 176 IPR046347 GO:0003700|GO:0006355
Tsu07g00497 297 SMART brlzneu 121 185 IPR004827 GO:0003700|GO:0006355
Tsu07g00497 297 Coils Coil 183 203 - -
Tsu07g00497 297 Pfam bZIP transcription factor 124 169 IPR004827 GO:0003700|GO:0006355
Tsu07g00497 297 Gene3D - 124 180 - -
Tsu07g00497 297 PANTHER BASIC LEUCINE ZIPPER 63 1 297 - -
Tsu07g00497 297 CDD bZIP_plant_GBF1 126 177 IPR045314 GO:0003700|GO:0006355
Tsu07g00497 297 MobiDBLite consensus disorder prediction 77 122 - -
Tsu07g00497 297 MobiDBLite consensus disorder prediction 77 102 - -
Tsu07g00497 297 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 123 186 IPR004827 GO:0003700|GO:0006355
Tsu07g00497 297 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 128 143 IPR004827 GO:0003700|GO:0006355
Tsu07g00497 297 PANTHER BZIP TRANSCRIPTION FACTOR 1 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00497 Tsu-Chr7 3879573 3883798 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00497 70 297 bZIP Transcription Factor Family AT5G24800 45.299 1.00e-46 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tsu07g00497 bZIP_1 5.4e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00497 K25784 - gmx:780555 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00497 07 3879573 3883798 Tsu01g00806 01 7272230 7277556 PCT