Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00490 ATGGTATCTATCATGGAAAGGGAACGAACTCGTAAACGACCTCGTCTCGCTTGGGATGCAGCTCCACCTCCCTCAATTCCACCGGCACAGAGAATTTCGGCGGTGGTTGGTGATGAAGGAATCGAAAAAAAGTATGCATCGCCGCCGAGGAGAGACGACGATCGTGATGGCCATTATGTGTTTAATCTTGGCGAAAATCTCACTCCTAGATATAAAATTCTCAGCAAAATGGGTGAAGGCACCTTTGGTCGAGTTTTGGAATGTTGGGATCGTCAAACTAGAGATTATGTAGCTATCAAGGTAATTAGAAGCATCAAGAAATATCGCGAGGCAGCAATGATCGAGGTTGATGTGCTTGAACGTCTTACAAAGAGTGATGTTGGATGCTCACGCTGTGTACAGATCTTAAATTGGTTTGATTACCGGAATCACATATGCATTGTTTTTGAGAAGCTTGGACCAAGCTTATTTGATTTTCTAAAGAGAAATAAATACTGCCCATTCCCTGTGGATCTTGTTCGTGAATTTGGACGACAGCTTTTGGAATCTGTAGCATATATGCATGAACTACGCCTAATCCACACTGACCTGAAGCCTGAAAACATACTTCTTGTTTCTTCTGACTATGTAAAACTTCCTACTTGCAAGAGGGTTTCGTCAGATGAAACACAATTTAGGTGCTTGCCCAAGTCTAGTGCTATTAAGCTGATTGATTTTGGAAGTACTGCATTTGCAAATCAGAGCCATAGCTCCATTGTTTCTACAAGGCATTACAGAGCCCCTGAGGTTATCTTAGGTAACGAAATGTCTTTCGTTGGTGAAAATGTGTTGCTTTACTTGTTTGTATATTCCTTTGTCCAGAGTAAATGTGTAACATCACATGTGGTGATTGAAGATGAAAATTGTGAATGA 912 0.4134 MVSIMERERTRKRPRLAWDAAPPPSIPPAQRISAVVGDEGIEKKYASPPRRDDDRDGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTRDYVAIKVIRSIKKYREAAMIEVDVLERLTKSDVGCSRCVQILNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHELRLIHTDLKPENILLVSSDYVKLPTCKRVSSDETQFRCLPKSSAIKLIDFGSTAFANQSHSSIVSTRHYRAPEVILGNEMSFVGENVLLYLFVYSFVQSKCVTSHVVIEDENCE 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00490 303 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Tsu07g00490 303 Gene3D Transferase(Phosphotransferase) domain 1 150 273 - -
Tsu07g00490 303 Pfam Protein kinase domain 71 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00490 303 MobiDBLite consensus disorder prediction 1 30 - -
Tsu07g00490 303 PANTHER BNAA07G37640D PROTEIN 46 266 - -
Tsu07g00490 303 ProSiteProfiles Protein kinase domain profile. 71 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00490 303 Gene3D Phosphorylase Kinase; domain 1 44 149 - -
Tsu07g00490 303 SMART serkin_6 71 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00490 303 SUPERFAMILY Protein kinase-like (PK-like) 58 270 IPR011009 -
Tsu07g00490 303 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 46 266 - -
Tsu07g00490 303 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00490 Tsu-Chr7 3839180 3841920 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00490 38 207 EF-hand Containing Proteins AT5G22840 36.723 3.26e-27 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Tsu07g00490 Pkinase 4.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00490 K08287 - gmx:100782453 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00490 07 3839180 3841920 Tsu07g00490 07 3839180 3841920 ECH