Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00469 ATGGAGAAGAGTGAAACGACGCTGGATTTAGCTTCTAGGAAATCGGTGAGGCATTTGGATTTCACTGCCGTCTATGGTGGTCCGGTACACCTGACACTGTCGCCACCGACGCCACAGTCAGTTTCACAAACTATTCTACAGCCGCCGACGAAGTCACGTACTGCGGCGCAATTGCAGTTGGATTTTCAGTTACTAGGGCGACGGACGTGGTTATGCTCACCGCCACGGTGGCAAGAGCAGAGAACATCACAGTCTCCGCCGGTAATGCCACGTTTACAATCACCGCAGTCAGAGTTAGTTTCTCCGGTTGGTCGAATACAGAAACTTCCGGTGAAGAGGTTGCAAGCTCATGAATCTCCTAGTCCTAGATCACAGTCTCAAAATAATGCAGGATTAAAGGACAACAccccaaagaaacaaaaacattgCAACTGCAAAAATTCTAGATGCCTTAAATTGTACTGTGAGTGCTTTGCAGCCGGGATCTATTGTGATGGTTGCAAATGTATAAATTGTCATAATAATGTGGACAATGAGACTGCTCGACAGGAGGCCGTTGGAATAACACTGGAAAGAAATCCAAATGCTTTCAAACCAAAAGTTGCAAGCAGTCCACAAAAACCAGAAGTTTCTATGGAAGTGTCTGAAACTCAAGTAATAGGAAAGCACAACAAAGGATGCCACTGCAAGAAATCAGGTTGCCTTAAGAAGTATTGTGAGTGTTTCCAAGCCAACGTCCTCTGCTCTGAAAATTGTAAATGCATGGACTGCAAGAATTTTGAAGGAAGTGACGAACGGAGAGCAGTTTTTCAAGAAGAGTGTAGTCTAGTTCAAATCAGACAGACAACTAATGCTGCCATTAGTGGAGCAGTTGGACCCTCCAGGCCTGGAACACACATAACACCCAAGAAGAGAAAAATCCAGGAAATATCTCCTGGCAAATTGTCCGTAAATCAAACTGTTAACATGACTGCTCATTACCAACAGGAACTTGATCCTATAGCTTCATCACCTTTATCCCTGTCAGCTTCCTTTGTTTCTGATACTGCCAACACAAGAACTTCAGGATCTTCAAGATCTACTTACAgGTCTGTGTTGGCTGATGTCCTCCAGACACAGAGTGTGAAGAATCTTTGTTCACTTTTAGTTGTTCTCTCCGGAGTAGCTGCAAATACAAATGCAGAAGTGAGAGGGAAAGTAGTTAGGAAAACCGGGACCAGGAAATATGAAGCTTCTATTGCTTCATCAGCTCAACCGCTGCAAGACAGTAGATCTGTTCTCAAGCCTGTTTGTGAGAATCACGCAAATAAAGATGTTGCAAATGCAGTTGATATTGACTTTCGTAATAGGCCACCATCACCAGAAACACTTGAATTGATGTGTGATGAACAGGATGTGATGTTTTTCGGTAATGGTTCTGCAAATGGAGTAGCAATTGACGACACTTATCTGAACATGATTCAGAAATCTTCCAATTCTGATGGATGCACCGATGCTTATGCAGAGCAGGAAAGGATTATCCTGACCAAGTTCAGGGATGTTCTTGGTGGACTCGTTACTCTTGGTAGCATAAAAGaaaCAAGGTACTCTTCACTAATGAAGAAAGATGTGGGAATCAAGAAAGGACCTATAGACAATGGTGATAGTGGTGCTGAAACTAAGGAAATTCTTGGCAACTGTACTACCAATTGCTCCATCCCAGCGGTTACGGATGTATATGAGGCCGCCAATGCAAGAACTAATGGACATGACACTATTGATCTTTCATTGAGGTTACCTGCAGTTTGA 1788 0.429 MEKSETTLDLASRKSVRHLDFTAVYGGPVHLTLSPPTPQSVSQTILQPPTKSRTAAQLQLDFQLLGRRTWLCSPPRWQEQRTSQSPPVMPRLQSPQSELVSPVGRIQKLPVKRLQAHESPSPRSQSQNNAGLKDNTPKKQKHCNCKNSRCLKLYCECFAAGIYCDGCKCINCHNNVDNETARQEAVGITLERNPNAFKPKVASSPQKPEVSMEVSETQVIGKHNKGCHCKKSGCLKKYCECFQANVLCSENCKCMDCKNFEGSDERRAVFQEECSLVQIRQTTNAAISGAVGPSRPGTHITPKKRKIQEISPGKLSVNQTVNMTAHYQQELDPIASSPLSLSASFVSDTANTRTSGSSRSTYRSVLADVLQTQSVKNLCSLLVVLSGVAANTNAEVRGKVVRKTGTRKYEASIASSAQPLQDSRSVLKPVCENHANKDVANAVDIDFRNRPPSPETLELMCDEQDVMFFGNGSANGVAIDDTYLNMIQKSSNSDGCTDAYAEQERIILTKFRDVLGGLVTLGSIKETRYSSLMKKDVGIKKGPIDNGDSGAETKEILGNCTTNCSIPAVTDVYEAANARTNGHDTIDLSLRLPAV 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00469 595 ProSiteProfiles CRC domain profile. 139 262 IPR005172 -
Tsu07g00469 595 SMART CXC_2 138 178 IPR033467 -
Tsu07g00469 595 SMART CXC_2 222 263 IPR033467 -
Tsu07g00469 595 PANTHER TESMIN/TSO1-RELATED 1 558 IPR028307 -
Tsu07g00469 595 MobiDBLite consensus disorder prediction 118 134 - -
Tsu07g00469 595 MobiDBLite consensus disorder prediction 76 101 - -
Tsu07g00469 595 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 225 259 IPR005172 -
Tsu07g00469 595 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 140 175 IPR005172 -
Tsu07g00469 595 MobiDBLite consensus disorder prediction 76 143 - -
Tsu07g00469 595 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 1 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00469 Tsu-Chr7 3639007 3644054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00469 10 537 CPP Transcription Factor Family AT4G29000 42.569 6.79e-120 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Tsu07g00469 TCR 2.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00469 - K21776 gmx:100811459 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00469 07 3639007 3644054 Tsu07g00469 07 3639007 3644054 ECH