Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00461 ATGGAGTGGGTCGTCGGCGGCAAATTTAAGATTGGTCGCAAAATCGGAAGTGGTTCATTCGGTGAAATTTATATCGCGTCAGATATGGATACCTCTGAGATCGTAGCCGTCaaaatggagaagaagaaaacaagGCATCCACAACTATTGTATGAGGCTAAATTATATAGTATTCTTCAAGGAGAAAGTGGTGTTCCAAGTATGAAATGGTGTGGTACTGATGGAGACCATAATGTTTTGGTTATTGATCTTTTGGGACGTAGTTTGGAGGACCTTTTTGTCTTCTGTGGGAGCAAGTTTTctttaaaaacagttttgaTGTTGGCCGACCAGATGCTTACGAGAATAGAATATATGCATTCCAAGGGATTTTTGCATAGAGACATAAAACCAGATAACTTTCTAATGGGTATTAGGAGAAAATCAAGTCAGgtttatattattgattttggACTAGGAAAAAGATATAGGGATCCCAAAACAAACAAGCATATTCCTTACAGAGAGAATAAAAATTTAACCGGGACTGCACGGTATGCAAGTTGCAATACTCACTTAGGAATTGAGCAAAGTCGACGTGATGATTTGGAGTCTATCGGCTATGTTCTTATGTACTTTTTAAGAGGAAGCCTTCCTTGGCAGGGTCTGAAAGCTGTCACCAAAGAGGAAAAATACGACAAGATTCGTGAGAAGAAGTTATCAACTTCCATTGAGAAACTTTGCGAGTCATATCCTGTGGAGTTCACGTCTTACTTTAATTATTGTCGCTCTTTGACATTTGATCAAGATCCAGATTATGAGTTCTTAAAGCGTCTGTTTCGTGATTTGTTCACTCGTGAAGGGTATGAGCATGACAATTTATTCGACTGGACCATCCTAAAACATCAGCAGACGCAACCGACAAAGAGACAAATGCAATCATCGCCTTCAAATGCTGTGCCTAGTGCTGTGCCCAGTGCTGTGCCTAGCAGTCTACAACCAATGATTGTGGAAAAACATACAGGAATCAATAATTCAGCTGAAATTACTGTAACAAAATTGGTAACCAATCTTGATCGTCTAAACGTGCGTGGTCAGCCTAAGCCATCCAATGGTCAGCCTAAGCCATTCAATGTTAAGAATCTAAATGCCAAGAATCATACCGGAAAACATAATGTGAACAATGGTCCATCCACTTCATCTGCTTTGCCGAAATCGACTACAGAAAATCTGGATTCCTTCATTACGGCGAATTTCTTCAGCCAAATAGCAGATAGTATATTTCGGAGGAGTCACTTAAagcttctttttattttcactgTTGCATACTATGTCATGCCACTCACTTCACCAGAGGAACCGGACTTAGGGTATTCATCTTTACAGCTTACAATGAACTCCAGCACCTCTGTCTCTAAATGCTCCGTTCATCAGCTCGAGAATATAGACGAGAATGTTCCTGCATCATCTTGCGCACAGCCTGAAACCCCAACAGAATCTATGGAGTTCCTTGCTAGATCTTGGAGTCTTTCTGCCACAGAACTCTCCAAAGCACTGCATAGCACCAATACTACGACGTCCACGGCCATTGAGATGCAACTCTTATGCTCTTCTGACCAGTTTTATACCAAAGGTTTCACTGCCTCTAAGGATTCTTTATCAAATGGGCGTTGTCCTCAGATTTTGCCAAAAGAAAGTGGCGAAACAAAGGATTTATTTCTACTCCATCAAGCACTTTCTCCAGAATTCCTGTCCAGTCAAAACTTGCTGAGAACTGGGCTTTACAGTAGCTTGATAAGAGGGAGGACAACAGGTAGGTGGTTGAAAGATCAGAAGGAGAGGAAAAAGCAGGAAATTAGGACTCATAATGCTCAGTTGCACGCCGCAGTATCGGTAGTTGGTGTTGCTGCCGCTGTTGCAGCCGTTGCTGCTTCAATAGCATCATCCGGAATGCCTAATGCCTACCAAAAGAACCCGACCATGACTTCTGCTGCAATTGCATCTGCAGCAGCTCTAGTAGCGTCTCACTGCATTGAGATTGCAGAAGATATGGGAGCTGAACAGGATCAAATCATAACAGCAGTTGACTCTGCTATTAATGCAAAAACTAATGGAGATATTATGACTCTAACAGCTGGAGCAGCTACAGCACTGCGAGGAGCTGCTACTTTAAAGGCGCGGCTGCAGAAGGGGTTTGGAGCTACTACAATTCCTCCAATTGAGGAGAAGTGCGGTGAATCCAAAGAAACAAACATATTGACAGCATTGGACTACGTCTTTAGAGGTGGAGTACTTCTCAAACGTACAAGAAAAGGAGTTCTTCATTGGAAACAAGTCTCTTTCAATGTTAATTCACATTTGCAGGTAGTAGCCAAAATGAAAAGCAAGCATATTGCAGGAACATTTACGAAAAAGAAGAAATATATAGTTGCCGGAGTGTGCAGCGATATCCCTGCTTGGCCGGGAAGGGAGAAGGAAGACATTGGCGAACAGAGAGCATATTTTGGAATAAAAGCAGAAGACAGATTAATAGAATTTGAATGTGGAAGTAAAGGAGACAAACTTTTCTGGTTAGAGGGAATCCAGTACATGTTGAATTGCAGCGCCAAAGTAACATACTAA 2601 0.4083 MEWVVGGKFKIGRKIGSGSFGEIYIASDMDTSEIVAVKMEKKKTRHPQLLYEAKLYSILQGESGVPSMKWCGTDGDHNVLVIDLLGRSLEDLFVFCGSKFSLKTVLMLADQMLTRIEYMHSKGFLHRDIKPDNFLMGIRRKSSQVYIIDFGLGKRYRDPKTNKHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESIGYVLMYFLRGSLPWQGLKAVTKEEKYDKIREKKLSTSIEKLCESYPVEFTSYFNYCRSLTFDQDPDYEFLKRLFRDLFTREGYEHDNLFDWTILKHQQTQPTKRQMQSSPSNAVPSAVPSAVPSSLQPMIVEKHTGINNSAEITVTKLVTNLDRLNVRGQPKPSNGQPKPFNVKNLNAKNHTGKHNVNNGPSTSSALPKSTTENLDSFITANFFSQIADSIFRRSHLKLLFIFTVAYYVMPLTSPEEPDLGYSSLQLTMNSSTSVSKCSVHQLENIDENVPASSCAQPETPTESMEFLARSWSLSATELSKALHSTNTTTSTAIEMQLLCSSDQFYTKGFTASKDSLSNGRCPQILPKESGETKDLFLLHQALSPEFLSSQNLLRTGLYSSLIRGRTTGRWLKDQKERKKQEIRTHNAQLHAAVSVVGVAAAVAAVAASIASSGMPNAYQKNPTMTSAAIASAAALVASHCIEIAEDMGAEQDQIITAVDSAINAKTNGDIMTLTAGAATALRGAATLKARLQKGFGATTIPPIEEKCGESKETNILTALDYVFRGGVLLKRTRKGVLHWKQVSFNVNSHLQVVAKMKSKHIAGTFTKKKKYIVAGVCSDIPAWPGREKEDIGEQRAYFGIKAEDRLIEFECGSKGDKLFWLEGIQYMLNCSAKVTY 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00461 866 Pfam Auxin canalisation 487 734 IPR008546 -
Tsu07g00461 866 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Tsu07g00461 866 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Tsu07g00461 866 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00461 866 SMART serkin_6 9 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00461 866 PANTHER CASEIN KINASE-RELATED 1 411 - -
Tsu07g00461 866 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 411 - -
Tsu07g00461 866 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Tsu07g00461 866 Pfam Plant pleckstrin homology-like region 758 861 IPR013666 -
Tsu07g00461 866 Gene3D Transferase(Phosphotransferase) domain 1 1 322 - -
Tsu07g00461 866 Pfam Protein kinase domain 10 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00461 Tsu-Chr7 3549499 3557919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00461 8 213 EF-hand Containing Proteins AT2G17890 27.700 1.83e-14 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Tsu07g00461 Auxin_canalis 1.2e-80 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00461 K08960 - gmx:100792736 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00461 07 3549499 3557919 Tsu01g00892 01 8146691 8151554 PCT