Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tsu07g00458 | ATGAAGCTGTTGAGAAAACGCGATATACCAGAAGACAAATATTCAAATGCATTTCTTGGATATGGGCCTGAAGATTCCTACTTTACAGTTGAACTCACTTATAATTATGGAGTCGATAAATATAACATTGGATCCGGTTTTGGTCATTTTGGTATTGTAACTGGAGATGTTTCAAAGACAGTAGATATTGTAAAAGCAAAAGGGGGAAAGGTTACCAGGGAACCAGGTCTTGTCAAAGGTGGCTCTGTAGTAACTGCTTCCATTGAAGATCCTAGTGGTTATAGGTTTGAGCTTTTTGAGAGAAAACTTACACGCGAACCCTTCTCCCAAGTGATGCTTCAAGTAGGCGATCTTGATCGTGTTGTAGCCTTCTATCAGAAAgCTGCAGGCATGAAACTTATCCGTAAGATAGACAACCCTGAGGAAAAGTACACAGTAGCCGTGTTGGGCTATGGTCCTGAAGCTAATGGTCCTGTTCTAGAACTGACATATAACTACGGCGTCACTAATTATGATAAAGGAAATGGTTATACACAGATTGCAATAGGCACGAATGATGTCTATAAGACTGCAGAAGCAATTAAATTAAGTGGAGGGAAGATTATCCGTGAACCTGGACCTTTACCGGGTATCAACACCAAGATCGTTGTTTGTTTGGACCCCGATGGTTGGAAACTGGTATTTGTTGATAATGTTGATTTTCTGAAGGAATTAGAGTGA | 720 | 0.4014 | MKLLRKRDIPEDKYSNAFLGYGPEDSYFTVELTYNYGVDKYNIGSGFGHFGIVTGDVSKTVDIVKAKGGKVTREPGLVKGGSVVTASIEDPSGYRFELFERKLTREPFSQVMLQVGDLDRVVAFYQKAAGMKLIRKIDNPEEKYTVAVLGYGPEANGPVLELTYNYGVTNYDKGNGYTQIAIGTNDVYKTAEAIKLSGGKIIREPGPLPGINTKIVVCLDPDGWKLVFVDNVDFLKELE | 239 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tsu07g00458 | 239 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 27 | 98 | IPR004360 | - | |
| Tsu07g00458 | 239 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 110 | 227 | IPR004360 | - | |
| Tsu07g00458 | 239 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 1 | 102 | IPR029068 | - | |
| Tsu07g00458 | 239 | TIGRFAM | glyox_I: lactoylglutathione lyase | 108 | 232 | IPR004361 | GO:0004462|GO:0046872 | |
| Tsu07g00458 | 239 | TIGRFAM | glyox_I: lactoylglutathione lyase | 1 | 108 | IPR004361 | GO:0004462|GO:0046872 | |
| Tsu07g00458 | 239 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 107 | 231 | IPR037523 | - | |
| Tsu07g00458 | 239 | PANTHER | LACTOYLGLUTATHIONE LYASE CHLOROPLASTIC-RELATED | 1 | 239 | - | - | |
| Tsu07g00458 | 239 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 108 | 232 | IPR029068 | - | |
| Tsu07g00458 | 239 | PANTHER | LACTOYLGLUTATHIONE LYASE | 1 | 239 | - | - | |
| Tsu07g00458 | 239 | Gene3D | - | 104 | 239 | IPR029068 | - | |
| Tsu07g00458 | 239 | Gene3D | - | 1 | 103 | IPR029068 | - | |
| Tsu07g00458 | 239 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 1 | 101 | IPR037523 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tsu07g00458 | Tsu-Chr7 | 3531152 | 3534256 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Tsu07g00458 | 110 | 230 | Calmodulin-binding Proteins | AT1G08110 | 25.342 | 1.43e-08 | 52.0 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tsu07g00458 | K01759 | - | mtr:MTR_3g110185 | 438.343 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Tsu07g00458 | 07 | 3531152 | 3534256 | Tsu07g00458 | 07 | 3531152 | 3534256 | ECH |